Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RAPGEF3O95398 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
RAPGEF3O95398 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
RAPGEF3O95398 RNU6-859P-201ENST00000362728 107 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 Y_RNA.535-201ENST00000384612 99 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 BX682237.1-201ENST00000415016 335 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 Z85995.1-201ENST00000415547 335 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AC009963.1-201ENST00000417265 157 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AL669831.1-202ENST00000428504 417 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.38□□□□□ -1.71
RAPGEF3O95398 GTF2IP13-201ENST00000438487 386 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.38□□□□□ -1.71
RAPGEF3O95398 PPP1R2P5-201ENST00000457256 603 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 RN7SL20P-201ENST00000488827 297 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 RNU2-69P-201ENST00000516061 100 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 RNU6-1256P-201ENST00000516539 103 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RAPGEF3O95398 AP000763.2-201ENST00000540641 163 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AP002770.2-201ENST00000543613 532 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AC090115.3-201ENST00000553218 849 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 SCOCP1-201ENST00000554676 349 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AL158827.2-201ENST00000602494 330 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AC090132.2-201ENST00000615881 347 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 RMST_7.1-201ENST00000621935 268 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 AL691447.3-201ENST00000635020 330 ntBASIC4.38□□□□□ -1.71
RAPGEF3O95398 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RAPGEF3O95398 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RAPGEF3O95398 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 AP003122.5-201ENST00000527668 3766 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 MIR301A-201ENST00000385261 86 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 MIR764-201ENST00000390811 85 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AL139039.1-201ENST00000401900 692 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 DYNLL1P5-201ENST00000467158 270 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 RPL31P60-201ENST00000478450 367 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AL160314.1-201ENST00000490836 438 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 MTCO1P29-201ENST00000496868 288 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 Y_RNA.675-201ENST00000516389 149 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 Y_RNA.676-201ENST00000516393 96 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 RNA5SP148-201ENST00000516527 94 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 RNA5SP291-201ENST00000517222 105 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC026464.5-201ENST00000562497 722 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 MIR5692A1-201ENST00000580523 69 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AL161798.1-201ENST00000604630 131 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC104237.2-201ENST00000612456 443 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC022418.1-201ENST00000624118 445 ntBASIC4.37□□□□□ -1.71
RAPGEF3O95398 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAPGEF3O95398 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAPGEF3O95398 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RAPGEF3O95398 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAPGEF3O95398 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 ZNF658B-202ENST00000615961 3375 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAPGEF3O95398 Y_RNA.813-201ENST00000364639 102 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 RNU6-741P-201ENST00000383889 107 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 RNA5SP219-201ENST00000390940 113 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 RPL21P41-201ENST00000459863 264 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC006445.2-201ENST00000510061 472 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 SNORA70.14-201ENST00000516205 110 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 SCARNA20.6-201ENST00000517251 106 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 AP001804.3-201ENST00000525146 880 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC027176.1-201ENST00000560204 514 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAPGEF3O95398 MIR4795-201ENST00000584182 89 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 CTHRC1P1-201ENST00000605383 469 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 AL121757.2-201ENST00000611223 313 ntBASIC4.36□□□□□ -1.71
RAPGEF3O95398 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAPGEF3O95398 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
RAPGEF3O95398 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAPGEF3O95398 Y_RNA.301-201ENST00000364990 103 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 RNU6-45P-201ENST00000384471 107 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 RNU2-33P-201ENST00000410344 192 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 RPS20P15-201ENST00000412792 311 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 RPLP0P7-201ENST00000416050 667 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 BTF3L4P3-201ENST00000418879 476 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 RPS12P18-201ENST00000442381 270 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 NIPA2P5-201ENST00000452282 464 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 snoU13.23-201ENST00000458863 104 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 RPS29P21-201ENST00000496272 170 ntBASIC4.35□□□□□ -1.71
RAPGEF3O95398 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAPGEF3O95398 AP000889.2-201ENST00000532684 490 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms