Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC096576.1-201ENST00000489014 359 ntBASIC3.05□□□□□ -1.92
RTN3O95197 RPL9P6-201ENST00000492764 598 ntBASIC3.05□□□□□ -1.92
RTN3O95197 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN3O95197 RPL37P25-201ENST00000507308 276 ntBASIC3.05□□□□□ -1.92
RTN3O95197 RNA5SP367-201ENST00000516557 118 ntBASIC3.05□□□□□ -1.92
RTN3O95197 RN7SKP219-201ENST00000516825 296 ntBASIC3.05□□□□□ -1.92
RTN3O95197 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.05□□□□□ -1.92
RTN3O95197 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AC135279.1-201ENST00000543493 504 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN3O95197 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTN3O95197 AC019159.1-201ENST00000605094 187 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN3O95197 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.05□□□□□ -1.92
RTN3O95197 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.05□□□□□ -1.92
RTN3O95197 AC139792.3-201ENST00000623525 224 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AC124864.2-201ENST00000624736 186 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
RTN3O95197 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTN3O95197 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN3O95197 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN3O95197 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.04□□□□□ -1.92
RTN3O95197 RNU1-109P-201ENST00000383960 147 ntBASIC3.04□□□□□ -1.92
RTN3O95197 RNU6-1083P-201ENST00000384022 107 ntBASIC3.04□□□□□ -1.92
RTN3O95197 MIR147B-201ENST00000390185 80 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AL591416.1-201ENST00000404015 867 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AL590004.2-201ENST00000404787 371 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AL513475.1-201ENST00000406602 315 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN3O95197 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN3O95197 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.04□□□□□ -1.92
RTN3O95197 AC025750.2-201ENST00000442609 450 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AL135938.1-201ENST00000443141 297 ntBASIC3.04□□□□□ -1.92
RTN3O95197 MTND1P1-201ENST00000445453 368 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN3O95197 OR5AQ1P-201ENST00000527596 927 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AP005435.4-201ENST00000529514 284 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC245505.1-201ENST00000556398 224 ntBASIC3.04□□□□□ -1.92
RTN3O95197 MTATP6P3-201ENST00000581686 676 ntBASIC3.04□□□□□ -1.92
RTN3O95197 ELOCP29-201ENST00000588193 334 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC024153.1-201ENST00000603103 365 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC116312.1-201ENST00000606841 314 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AP001596.2-201ENST00000608410 312 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC087241.4-201ENST00000612441 480 ntBASIC3.04□□□□□ -1.92
RTN3O95197 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.04□□□□□ -1.92
RTN3O95197 MIR7515-201ENST00000637837 67 ntBASIC3.04□□□□□ -1.92
RTN3O95197 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RTN3O95197 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RTN3O95197 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTN3O95197 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RTN3O95197 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTN3O95197 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RTN3O95197 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-552P-201ENST00000362869 119 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-715P-201ENST00000365204 103 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU1-100P-201ENST00000365255 165 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-996P-201ENST00000365438 107 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-45P-201ENST00000384471 107 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-748P-201ENST00000384648 107 ntBASIC3.03□□□□□ -1.92
RTN3O95197 SNORD116-4-201ENST00000384733 96 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-903P-201ENST00000391270 109 ntBASIC3.03□□□□□ -1.92
RTN3O95197 U3.37-201ENST00000408528 213 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.03□□□□□ -1.92
RTN3O95197 AC016831.2-201ENST00000417179 352 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN3O95197 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.03□□□□□ -1.92
RTN3O95197 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN3O95197 AL441985.1-201ENST00000457727 251 ntBASIC3.03□□□□□ -1.92
RTN3O95197 SNRPFP3-201ENST00000457792 225 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
RTN3O95197 HIGD1AP13-201ENST00000509878 289 ntBASIC3.03□□□□□ -1.92
RTN3O95197 LRRC34P2-201ENST00000514850 553 ntBASIC3.03□□□□□ -1.92
RTN3O95197 MIR892C-201ENST00000516410 77 ntBASIC3.03□□□□□ -1.92
RTN3O95197 RNU6-1178P-201ENST00000516674 107 ntBASIC3.03□□□□□ -1.92
RTN3O95197 ACA59.2-201ENST00000517061 156 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.03□□□□□ -1.92
RTN3O95197 AP001893.2-201ENST00000526949 202 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.03□□□□□ -1.92
RTN3O95197 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN3O95197 AC073539.2-201ENST00000597113 165 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AP001330.5-201ENST00000607176 411 ntBASIC3.03□□□□□ -1.92
RTN3O95197 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.03□□□□□ -1.92
RTN3O95197 RMST_4.1-201ENST00000616886 107 ntBASIC3.03□□□□□ -1.92
RTN3O95197 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN3O95197 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.03□□□□□ -1.92
RTN3O95197 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.03□□□□□ -1.92
RTN3O95197 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.03□□□□□ -1.92
RTN3O95197 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RTN3O95197 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
RTN3O95197 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTN3O95197 MTND4P14-201ENST00000435799 1354 ntBASIC3.02□□□□□ -1.93
RTN3O95197 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTN3O95197 Y_RNA.481-201ENST00000384373 102 ntBASIC3.02□□□□□ -1.93
RTN3O95197 RNU6-1158P-201ENST00000391167 107 ntBASIC3.02□□□□□ -1.93
RTN3O95197 MTCO3P40-201ENST00000392516 676 ntBASIC3.02□□□□□ -1.93
RTN3O95197 TOMM20P4-201ENST00000427861 435 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN3O95197 RPS15AP7-201ENST00000439294 405 ntBASIC3.02□□□□□ -1.93
RTN3O95197 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.02□□□□□ -1.93
RTN3O95197 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms