Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.85□□□□□ -2.11
NPHP4O75161 AC022447.1-201ENST00000515358 464 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 RNU6-927P-201ENST00000516199 100 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AP005435.4-201ENST00000529514 284 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AC010186.2-204ENST00000537668 439 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.85□□□□□ -2.11
NPHP4O75161 RPL21P5-201ENST00000554662 472 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 MTCYBP23-201ENST00000558717 1102 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.85□□□□□ -2.11
NPHP4O75161 AC007151.1-201ENST00000572774 483 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AC090079.2-201ENST00000575289 768 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 MIR5571-201ENST00000577998 113 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.85□□□□□ -2.11
NPHP4O75161 AC025588.2-201ENST00000604851 466 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 AL021997.1-201ENST00000605757 193 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NPHP4O75161 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.85□□□□□ -2.11
NPHP4O75161 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NPHP4O75161 PCMTD1P7-201ENST00000634506 357 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NPHP4O75161 MTND5P33-201ENST00000571250 1450 ntBASIC1.85□□□□□ -2.11
NPHP4O75161 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.85□□□□□ -2.11
NPHP4O75161 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.85□□□□□ -2.11
NPHP4O75161 RNA5SP125-201ENST00000364843 120 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 RNU6-1242P-201ENST00000391052 103 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AL033519.2-201ENST00000403958 392 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AL359704.1-201ENST00000411586 781 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 CYCSP48-201ENST00000417124 323 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.84□□□□□ -2.11
NPHP4O75161 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.84□□□□□ -2.11
NPHP4O75161 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.84□□□□□ -2.11
NPHP4O75161 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.84□□□□□ -2.11
NPHP4O75161 IFNA20P-201ENST00000436840 528 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.84□□□□□ -2.11
NPHP4O75161 ELOCP30-201ENST00000447108 299 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.84□□□□□ -2.11
NPHP4O75161 MTATP6P7-201ENST00000453315 681 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.84□□□□□ -2.11
NPHP4O75161 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NPHP4O75161 AC110760.3-202ENST00000515177 371 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.84□□□□□ -2.11
NPHP4O75161 AC009712.1-201ENST00000564938 316 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.84□□□□□ -2.11
NPHP4O75161 AC090897.2-201ENST00000581715 130 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.84□□□□□ -2.11
NPHP4O75161 MIR3616-201ENST00000584070 92 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AL161798.1-201ENST00000604630 131 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AP000676.3-201ENST00000623299 569 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 AC097655.1-201ENST00000635075 318 ntBASIC1.84□□□□□ -2.11
NPHP4O75161 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NPHP4O75161 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.83□□□□□ -2.12
NPHP4O75161 AL355497.1-201ENST00000406262 551 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 SNORD23.1-201ENST00000408212 104 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 NDUFS5P4-201ENST00000412983 318 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 MTATP6P20-201ENST00000414147 562 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC096649.2-201ENST00000416186 393 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 SEPT2P1-201ENST00000419651 180 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 RPL36AP53-201ENST00000432891 316 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 MTCO2P20-201ENST00000437339 673 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 RSU1P2-202ENST00000437884 485 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC098831.1-201ENST00000440661 216 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.83□□□□□ -2.12
NPHP4O75161 EXOSC3P1-201ENST00000448649 500 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC021739.1-201ENST00000559631 174 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 MIR3167-201ENST00000579623 85 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.83□□□□□ -2.12
NPHP4O75161 AL391813.1-201ENST00000603098 260 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AL158050.2-201ENST00000605336 568 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC080013.3-201ENST00000606839 578 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC007038.2-201ENST00000608095 740 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AF129408.1-201ENST00000608767 431 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.83□□□□□ -2.12
NPHP4O75161 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NPHP4O75161 RNU6-1083P-201ENST00000384022 107 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 RNU6-658P-201ENST00000384606 106 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 RNU6-920P-201ENST00000410926 92 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.83□□□□□ -2.12
NPHP4O75161 RPL30P4-201ENST00000429309 333 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 GPM6BP2-201ENST00000432046 144 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 GPM6BP1-201ENST00000446387 144 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC010587.2-201ENST00000511727 448 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 SNORA25.11-201ENST00000515935 105 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 SCARNA3-201ENST00000517097 143 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.83□□□□□ -2.12
NPHP4O75161 AC093012.1-202ENST00000549403 582 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AC073544.2-201ENST00000601155 540 ntBASIC1.83□□□□□ -2.12
NPHP4O75161 AL596327.1-201ENST00000603629 213 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms