Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 RN7SL601P-201ENST00000471221 293 ntBASIC3.42□□□□□ -1.86
RRP9O43818 AC103975.1-201ENST00000482506 483 ntBASIC3.42□□□□□ -1.86
RRP9O43818 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.42□□□□□ -1.86
RRP9O43818 AC006445.2-201ENST00000510061 472 ntBASIC3.42□□□□□ -1.86
RRP9O43818 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.42□□□□□ -1.86
RRP9O43818 RNU6-277P-201ENST00000516272 106 ntBASIC3.42□□□□□ -1.86
RRP9O43818 RNU6-566P-201ENST00000516790 107 ntBASIC3.42□□□□□ -1.86
RRP9O43818 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RRP9O43818 TVP23BP1-201ENST00000557500 617 ntBASIC3.42□□□□□ -1.86
RRP9O43818 MIR4795-201ENST00000584182 89 ntBASIC3.42□□□□□ -1.86
RRP9O43818 AL645944.1-201ENST00000603857 493 ntBASIC3.42□□□□□ -1.86
RRP9O43818 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.42□□□□□ -1.86
RRP9O43818 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RRP9O43818 AL138726.1-201ENST00000614873 333 ntBASIC3.42□□□□□ -1.86
RRP9O43818 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.42□□□□□ -1.86
RRP9O43818 AC006111.3-201ENST00000622137 383 ntBASIC3.42□□□□□ -1.86
RRP9O43818 AC002064.3-201ENST00000623448 346 ntBASIC3.42□□□□□ -1.86
RRP9O43818 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.42□□□□□ -1.86
RRP9O43818 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.42□□□□□ -1.86
RRP9O43818 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.42□□□□□ -1.86
RRP9O43818 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RRP9O43818 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RRP9O43818 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.41□□□□□ -1.86
RRP9O43818 HMGN2P30-201ENST00000423237 256 ntBASIC3.41□□□□□ -1.86
RRP9O43818 AL359672.1-201ENST00000442302 409 ntBASIC3.41□□□□□ -1.86
RRP9O43818 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.41□□□□□ -1.86
RRP9O43818 RPS29P12-201ENST00000460178 152 ntBASIC3.41□□□□□ -1.86
RRP9O43818 UQCRHP4-201ENST00000471686 272 ntBASIC3.41□□□□□ -1.86
RRP9O43818 RPL30P14-201ENST00000482744 348 ntBASIC3.41□□□□□ -1.86
RRP9O43818 RPL32P34-201ENST00000486380 400 ntBASIC3.41□□□□□ -1.86
RRP9O43818 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.41□□□□□ -1.86
RRP9O43818 RPL39P5-202ENST00000512505 151 ntBASIC3.41□□□□□ -1.86
RRP9O43818 RNU6-1332P-201ENST00000516666 104 ntBASIC3.41□□□□□ -1.86
RRP9O43818 SCARNA13-201ENST00000516672 275 ntBASIC3.41□□□□□ -1.86
RRP9O43818 RNA5SP454-201ENST00000517231 127 ntBASIC3.41□□□□□ -1.86
RRP9O43818 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.41□□□□□ -1.86
RRP9O43818 COPS8P3-201ENST00000526024 482 ntBASIC3.41□□□□□ -1.86
RRP9O43818 AC093027.1-201ENST00000546698 429 ntBASIC3.41□□□□□ -1.86
RRP9O43818 AL355375.2-201ENST00000574825 175 ntBASIC3.41□□□□□ -1.86
RRP9O43818 MIR4790-201ENST00000577799 79 ntBASIC3.41□□□□□ -1.86
RRP9O43818 MIR4446-201ENST00000578505 67 ntBASIC3.41□□□□□ -1.86
RRP9O43818 MIR3609-201ENST00000582661 80 ntBASIC3.41□□□□□ -1.86
RRP9O43818 NUTF2P8-201ENST00000604593 363 ntBASIC3.41□□□□□ -1.86
RRP9O43818 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
RRP9O43818 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
RRP9O43818 ZNF519P1-201ENST00000449011 1626 ntBASIC3.41□□□□□ -1.86
RRP9O43818 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RRP9O43818 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
RRP9O43818 ZNF271P-202ENST00000465539 1970 ntBASIC3.4□□□□□ -1.86
RRP9O43818 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RRP9O43818 MIR383-201ENST00000362257 73 ntBASIC3.4□□□□□ -1.87
RRP9O43818 RNU6-384P-201ENST00000364900 104 ntBASIC3.4□□□□□ -1.87
RRP9O43818 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RRP9O43818 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RRP9O43818 SNORD116-11-201ENST00000383882 92 ntBASIC3.4□□□□□ -1.87
RRP9O43818 Y_RNA.474-201ENST00000384341 102 ntBASIC3.4□□□□□ -1.87
RRP9O43818 RNU6-166P-201ENST00000384371 107 ntBASIC3.4□□□□□ -1.87
RRP9O43818 Y_RNA.535-201ENST00000384612 99 ntBASIC3.4□□□□□ -1.87
RRP9O43818 U3.22-201ENST00000391120 215 ntBASIC3.4□□□□□ -1.87
RRP9O43818 MIR888-201ENST00000401186 77 ntBASIC3.4□□□□□ -1.87
RRP9O43818 MIR548K-201ENST00000408406 116 ntBASIC3.4□□□□□ -1.87
RRP9O43818 MIR548F5-201ENST00000408421 86 ntBASIC3.4□□□□□ -1.87
RRP9O43818 RPL26P27-201ENST00000414397 437 ntBASIC3.4□□□□□ -1.87
RRP9O43818 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.4□□□□□ -1.87
RRP9O43818 TOMM20P4-201ENST00000427861 435 ntBASIC3.4□□□□□ -1.87
RRP9O43818 HMGB1P9-201ENST00000429856 646 ntBASIC3.4□□□□□ -1.87
RRP9O43818 SNAP23P1-201ENST00000433229 246 ntBASIC3.4□□□□□ -1.87
RRP9O43818 RPL32P28-201ENST00000443577 397 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.4□□□□□ -1.87
RRP9O43818 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.4□□□□□ -1.87
RRP9O43818 RPL37P4-201ENST00000448908 268 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC107399.1-201ENST00000451226 265 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.4□□□□□ -1.87
RRP9O43818 AC092798.1-201ENST00000458542 409 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC073901.1-201ENST00000462471 408 ntBASIC3.4□□□□□ -1.87
RRP9O43818 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.4□□□□□ -1.87
RRP9O43818 AC008526.1-201ENST00000509149 338 ntBASIC3.4□□□□□ -1.87
RRP9O43818 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.4□□□□□ -1.87
RRP9O43818 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RRP9O43818 RNU6-928P-201ENST00000516876 104 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.4□□□□□ -1.87
RRP9O43818 AC025423.5-201ENST00000550230 219 ntBASIC3.4□□□□□ -1.87
RRP9O43818 HIGD1AP1-201ENST00000550979 275 ntBASIC3.4□□□□□ -1.87
RRP9O43818 H3F3AP1-201ENST00000559984 334 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC023575.1-201ENST00000580510 358 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.4□□□□□ -1.87
RRP9O43818 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.4□□□□□ -1.87
RRP9O43818 APOOP1-201ENST00000604695 592 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC113139.1-201ENST00000605049 239 ntBASIC3.4□□□□□ -1.87
RRP9O43818 RNU6-85P-201ENST00000605989 107 ntBASIC3.4□□□□□ -1.87
RRP9O43818 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AP003355.3-201ENST00000623465 114 ntBASIC3.4□□□□□ -1.87
RRP9O43818 AC022140.2-201ENST00000623500 188 ntBASIC3.4□□□□□ -1.87
RRP9O43818 U2.21-201ENST00000637295 81 ntBASIC3.4□□□□□ -1.87
RRP9O43818 U6.99-201ENST00000637524 83 ntBASIC3.4□□□□□ -1.87
RRP9O43818 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RRP9O43818 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.39□□□□□ -1.87
RRP9O43818 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RRP9O43818 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RRP9O43818 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms