Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 RNU6-1115P-201ENST00000362490 106 ntBASIC3.51□□□□□ -1.85
PROM1O43490 RNU6-1167P-201ENST00000363227 94 ntBASIC3.51□□□□□ -1.85
PROM1O43490 Y_RNA.144-201ENST00000363521 113 ntBASIC3.51□□□□□ -1.85
PROM1O43490 Y_RNA.148-201ENST00000363557 117 ntBASIC3.51□□□□□ -1.85
PROM1O43490 MIR34B-201ENST00000385076 84 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AL356057.3-201ENST00000402607 340 ntBASIC3.51□□□□□ -1.85
PROM1O43490 Z99755.1-201ENST00000414048 380 ntBASIC3.51□□□□□ -1.85
PROM1O43490 UBE2V1P4-201ENST00000425374 344 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AC097713.2-201ENST00000430199 356 ntBASIC3.51□□□□□ -1.85
PROM1O43490 USP9YP30-201ENST00000430729 455 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.51□□□□□ -1.85
PROM1O43490 AC087588.1-201ENST00000462203 316 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AC018437.1-201ENST00000492214 406 ntBASIC3.51□□□□□ -1.85
PROM1O43490 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.51□□□□□ -1.85
PROM1O43490 AL359273.1-201ENST00000510918 627 ntBASIC3.51□□□□□ -1.85
PROM1O43490 SNORA74D-201ENST00000516404 141 ntBASIC3.51□□□□□ -1.85
PROM1O43490 RNU6-1256P-201ENST00000516539 103 ntBASIC3.51□□□□□ -1.85
PROM1O43490 Y_RNA.720-201ENST00000517166 92 ntBASIC3.51□□□□□ -1.85
PROM1O43490 RNU6-1315P-201ENST00000517187 99 ntBASIC3.51□□□□□ -1.85
PROM1O43490 SNORA70.24-201ENST00000517233 118 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.51□□□□□ -1.85
PROM1O43490 AC026403.1-201ENST00000518938 295 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AC009902.1-201ENST00000519351 183 ntBASIC3.51□□□□□ -1.85
PROM1O43490 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.51□□□□□ -1.85
PROM1O43490 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.51□□□□□ -1.85
PROM1O43490 MED28P6-201ENST00000558776 231 ntBASIC3.51□□□□□ -1.85
PROM1O43490 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
PROM1O43490 MIR3200-201ENST00000580767 85 ntBASIC3.51□□□□□ -1.85
PROM1O43490 OR1M4P-201ENST00000589199 287 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.51□□□□□ -1.85
PROM1O43490 ELOCP5-201ENST00000604924 333 ntBASIC3.51□□□□□ -1.85
PROM1O43490 RMST_8.1-201ENST00000610287 165 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AC068831.7-201ENST00000616954 363 ntBASIC3.51□□□□□ -1.85
PROM1O43490 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
PROM1O43490 SNORD39.4-201ENST00000620099 78 ntBASIC3.51□□□□□ -1.85
PROM1O43490 AL732372.2-225ENST00000642124 456 ntBASIC3.51□□□□□ -1.85
PROM1O43490 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PROM1O43490 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.5□□□□□ -1.85
PROM1O43490 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PROM1O43490 Y_RNA.5-201ENST00000362334 102 ntBASIC3.5□□□□□ -1.85
PROM1O43490 RNU6-331P-201ENST00000384724 107 ntBASIC3.5□□□□□ -1.85
PROM1O43490 MIR301A-201ENST00000385261 86 ntBASIC3.5□□□□□ -1.85
PROM1O43490 SNORD73A-201ENST00000386062 65 ntBASIC3.5□□□□□ -1.85
PROM1O43490 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PROM1O43490 SNORA75.6-201ENST00000391318 127 ntBASIC3.5□□□□□ -1.85
PROM1O43490 RPS15AP6-201ENST00000420703 385 ntBASIC3.5□□□□□ -1.85
PROM1O43490 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.5□□□□□ -1.85
PROM1O43490 UBE2D3P2-201ENST00000424409 445 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.5□□□□□ -1.85
PROM1O43490 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.5□□□□□ -1.85
PROM1O43490 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.5□□□□□ -1.85
PROM1O43490 MTND5P22-201ENST00000458380 195 ntBASIC3.5□□□□□ -1.85
PROM1O43490 RNU7-187P-201ENST00000458985 68 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AC021146.2-201ENST00000504736 556 ntBASIC3.5□□□□□ -1.85
PROM1O43490 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.5□□□□□ -1.85
PROM1O43490 AC008716.1-201ENST00000511084 513 ntBASIC3.5□□□□□ -1.85
PROM1O43490 RN7SKP83-201ENST00000516512 178 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AC007991.1-201ENST00000522680 631 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.5□□□□□ -1.85
PROM1O43490 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.5□□□□□ -1.85
PROM1O43490 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.5□□□□□ -1.85
PROM1O43490 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.5□□□□□ -1.85
PROM1O43490 AC007938.3-201ENST00000604965 623 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AP002826.1-201ENST00000608835 315 ntBASIC3.5□□□□□ -1.85
PROM1O43490 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PROM1O43490 AC002076.2-201ENST00000617362 122 ntBASIC3.5□□□□□ -1.85
PROM1O43490 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AL078596.1-201ENST00000624856 447 ntBASIC3.5□□□□□ -1.85
PROM1O43490 AL034408.1-202ENST00000636088 415 ntBASIC3.5□□□□□ -1.85
PROM1O43490 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.5□□□□□ -1.85
PROM1O43490 MTND5P30-201ENST00000452896 1731 ntBASIC3.5□□□□□ -1.85
PROM1O43490 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.5□□□□□ -1.85
PROM1O43490 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PROM1O43490 RNU6-1059P-201ENST00000363752 98 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC117470.1-201ENST00000381974 330 ntBASIC3.49□□□□□ -1.85
PROM1O43490 MIR184-201ENST00000384962 84 ntBASIC3.49□□□□□ -1.85
PROM1O43490 RNU6-1077P-201ENST00000410506 102 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.49□□□□□ -1.85
PROM1O43490 MTCYBP10-201ENST00000424905 650 ntBASIC3.49□□□□□ -1.85
PROM1O43490 USMG5P1-201ENST00000425964 177 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC007919.1-201ENST00000429380 217 ntBASIC3.49□□□□□ -1.85
PROM1O43490 NDUFB1P1-201ENST00000435191 180 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.49□□□□□ -1.85
PROM1O43490 RPS29P31-201ENST00000446147 164 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.49□□□□□ -1.85
PROM1O43490 HMGN2P13-201ENST00000476476 274 ntBASIC3.49□□□□□ -1.85
PROM1O43490 HMGB1P30-201ENST00000492455 606 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC026784.1-201ENST00000507986 352 ntBASIC3.49□□□□□ -1.85
PROM1O43490 RNU1-95P-201ENST00000516357 160 ntBASIC3.49□□□□□ -1.85
PROM1O43490 SCARNA16.2-201ENST00000516520 172 ntBASIC3.49□□□□□ -1.85
PROM1O43490 RNU1-128P-201ENST00000516704 160 ntBASIC3.49□□□□□ -1.85
PROM1O43490 IGHV3-76-201ENST00000522465 295 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC008011.1-201ENST00000545989 227 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AL157871.3-201ENST00000557231 293 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AL161798.1-201ENST00000604630 131 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC006157.1-201ENST00000611750 366 ntBASIC3.49□□□□□ -1.85
PROM1O43490 AC007485.1-201ENST00000616755 206 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms