Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 PIGPP2-201ENST00000411569 458 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.99□□□□□ -2.25
HMGB3O15347 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGB3O15347 AL035407.1-201ENST00000429211 571 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 MTND5P25-201ENST00000430499 799 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGB3O15347 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.99□□□□□ -2.25
HMGB3O15347 RPS29P29-201ENST00000456396 171 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 RNU1-123P-201ENST00000458950 160 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC104563.1-201ENST00000476147 376 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGB3O15347 RNU6-295P-201ENST00000516901 104 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 SNORA31.17-201ENST00000516953 127 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC009902.1-201ENST00000519351 183 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGB3O15347 MTCO3P15-201ENST00000526563 574 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.99□□□□□ -2.25
HMGB3O15347 AC091544.4-201ENST00000555268 342 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 SNORA77B-201ENST00000578179 125 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC126365.2-201ENST00000580630 379 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 MIR3683-201ENST00000580847 82 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC073410.2-201ENST00000603240 332 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 AC026741.1-201ENST00000605892 482 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 HAUS6P2-201ENST00000433254 2404 ntBASIC0.99□□□□□ -2.25
HMGB3O15347 FARSBP1-201ENST00000435808 1778 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 RNA5SP190-201ENST00000365222 118 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 RNU6-354P-201ENST00000383862 107 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 RNU6-610P-201ENST00000384264 107 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 RNU6-1274P-201ENST00000384557 107 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 MIR186-201ENST00000384988 86 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AL079342.2-201ENST00000403367 482 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AL359634.1-202ENST00000404721 284 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC068533.2-201ENST00000411872 306 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGB3O15347 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGB3O15347 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGB3O15347 AC104058.1-201ENST00000448028 297 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 MTND2P3-201ENST00000452458 470 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 RPS26P55-201ENST00000471178 356 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC132942.1-201ENST00000486753 483 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC010409.1-201ENST00000487382 476 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.98□□□□□ -2.25
HMGB3O15347 AC022784.5-201ENST00000522241 437 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 SUB1P4-201ENST00000566062 339 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC002400.1-201ENST00000569310 726 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.98□□□□□ -2.25
HMGB3O15347 AC090970.3-201ENST00000612566 866 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC097655.1-201ENST00000635075 318 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 AC099654.9-201ENST00000637055 678 ntBASIC0.98□□□□□ -2.25
HMGB3O15347 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
HMGB3O15347 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.97□□□□□ -2.25
HMGB3O15347 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
HMGB3O15347 MIR302D-201ENST00000362275 68 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 RNU6-207P-201ENST00000384137 107 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 FTH1P15-201ENST00000406984 280 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 NCOR1P3-201ENST00000420479 303 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 USP9YP18-201ENST00000425912 695 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 MTCO3P43-201ENST00000440974 771 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGB3O15347 SNORD13-201ENST00000459299 104 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 TRBV12-1-201ENST00000479785 344 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 RPF2P2-201ENST00000504693 896 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGB3O15347 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.97□□□□□ -2.25
HMGB3O15347 RNU6-1225P-201ENST00000516336 65 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 RNU6-751P-201ENST00000516382 101 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGB3O15347 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGB3O15347 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGB3O15347 RPL21P5-201ENST00000554662 472 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 DNAJC19P9-201ENST00000555084 351 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.97□□□□□ -2.25
HMGB3O15347 AL133153.1-201ENST00000557756 303 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AC019288.1-201ENST00000557918 224 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGB3O15347 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.97□□□□□ -2.25
HMGB3O15347 AL445435.1-201ENST00000604232 665 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGB3O15347 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 AC012360.2-201ENST00000609349 391 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 Z82243.1-201ENST00000609432 473 ntBASIC0.97□□□□□ -2.25
HMGB3O15347 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.97□□□□□ -2.25
HMGB3O15347 Y_RNA.99-201ENST00000363138 105 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGB3O15347 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.96□□□□□ -2.26
HMGB3O15347 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.96□□□□□ -2.26
HMGB3O15347 CR769776.1-201ENST00000441254 787 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AL035666.1-201ENST00000446195 348 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 BTF3P15-201ENST00000455606 336 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 RPL30P7-201ENST00000479312 323 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AC104629.1-201ENST00000494226 508 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.96□□□□□ -2.26
HMGB3O15347 AC018630.3-201ENST00000542637 96 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.96□□□□□ -2.26
HMGB3O15347 AC123912.5-201ENST00000605470 343 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AC004908.3-201ENST00000610248 625 ntBASIC0.96□□□□□ -2.26
HMGB3O15347 AL121890.5-201ENST00000620848 304 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms