Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RPS20P15-201ENST00000412792 311 ntBASIC1.87□□□□□ -2.11
LSM1O15116 MTATP6P19-201ENST00000413797 659 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AC092809.3-201ENST00000415453 231 ntBASIC1.87□□□□□ -2.11
LSM1O15116 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.87□□□□□ -2.11
LSM1O15116 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM1O15116 AL445685.2-201ENST00000422551 342 ntBASIC1.87□□□□□ -2.11
LSM1O15116 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM1O15116 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM1O15116 AL445646.1-201ENST00000431784 216 ntBASIC1.87□□□□□ -2.11
LSM1O15116 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM1O15116 RPL23AP6-201ENST00000446637 472 ntBASIC1.87□□□□□ -2.11
LSM1O15116 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.87□□□□□ -2.11
LSM1O15116 UBE2DNL-203ENST00000474922 222 ntBASIC1.87□□□□□ -2.11
LSM1O15116 RPL9P6-201ENST00000492764 598 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM1O15116 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM1O15116 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM1O15116 RNU6-677P-201ENST00000516914 101 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.87□□□□□ -2.11
LSM1O15116 AC243960.4-201ENST00000600532 288 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AP001981.2-201ENST00000603241 418 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AL022154.1-201ENST00000604698 785 ntBASIC1.87□□□□□ -2.11
LSM1O15116 MIR15A-201ENST00000607334 83 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AC098614.4-201ENST00000607601 462 ntBASIC1.87□□□□□ -2.11
LSM1O15116 AC103706.2-201ENST00000638080 240 ntBASIC1.87□□□□□ -2.11
LSM1O15116 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
LSM1O15116 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
LSM1O15116 AC092104.1-201ENST00000497346 1441 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM1O15116 Y_RNA.33-201ENST00000362591 102 ntBASIC1.86□□□□□ -2.11
LSM1O15116 RNU6-1010P-201ENST00000362757 107 ntBASIC1.86□□□□□ -2.11
LSM1O15116 RNU6-946P-201ENST00000383878 107 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AL356432.1-201ENST00000405809 419 ntBASIC1.86□□□□□ -2.11
LSM1O15116 RN7SKP192-201ENST00000411291 327 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AC016831.2-201ENST00000417179 352 ntBASIC1.86□□□□□ -2.11
LSM1O15116 PGBD4P6-201ENST00000421501 610 ntBASIC1.86□□□□□ -2.11
LSM1O15116 DPH3P2-201ENST00000422618 250 ntBASIC1.86□□□□□ -2.11
LSM1O15116 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM1O15116 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM1O15116 AC096638.1-201ENST00000444678 216 ntBASIC1.86□□□□□ -2.11
LSM1O15116 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM1O15116 KATNBL1P6-201ENST00000453433 915 ntBASIC1.86□□□□□ -2.11
LSM1O15116 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM1O15116 AL139824.2-201ENST00000458731 1095 ntBASIC1.86□□□□□ -2.11
LSM1O15116 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.86□□□□□ -2.11
LSM1O15116 HMGB1P35-201ENST00000503360 598 ntBASIC1.86□□□□□ -2.11
LSM1O15116 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LSM1O15116 AP003122.4-201ENST00000530980 758 ntBASIC1.86□□□□□ -2.11
LSM1O15116 OR5AL2P-201ENST00000532185 920 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM1O15116 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM1O15116 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM1O15116 AC018638.7-201ENST00000605836 1114 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
LSM1O15116 FRG1KP-201ENST00000623592 341 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AC010608.3-201ENST00000625048 527 ntBASIC1.86□□□□□ -2.11
LSM1O15116 AL391994.1-201ENST00000254724 282 ntBASIC1.85□□□□□ -2.11
LSM1O15116 RNU6-395P-201ENST00000365662 106 ntBASIC1.85□□□□□ -2.11
LSM1O15116 RNU6-843P-201ENST00000384454 104 ntBASIC1.85□□□□□ -2.11
LSM1O15116 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
LSM1O15116 RPL22P18-201ENST00000417197 377 ntBASIC1.85□□□□□ -2.11
LSM1O15116 Z98742.3-201ENST00000418637 326 ntBASIC1.85□□□□□ -2.11
LSM1O15116 MTND1P20-201ENST00000430341 950 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AL008629.1-201ENST00000438615 184 ntBASIC1.85□□□□□ -2.11
LSM1O15116 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LSM1O15116 GDI2P2-201ENST00000445131 608 ntBASIC1.85□□□□□ -2.11
LSM1O15116 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM1O15116 AL353705.4-201ENST00000449661 238 ntBASIC1.85□□□□□ -2.11
LSM1O15116 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM1O15116 snoU109.1-201ENST00000459339 135 ntBASIC1.85□□□□□ -2.11
LSM1O15116 MED28P2-201ENST00000475771 317 ntBASIC1.85□□□□□ -2.11
LSM1O15116 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM1O15116 AC119751.4-201ENST00000507498 357 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AC109329.1-201ENST00000518744 317 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM1O15116 AC135279.1-201ENST00000543493 504 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.85□□□□□ -2.11
LSM1O15116 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM1O15116 IMMP1LP2-201ENST00000552954 492 ntBASIC1.85□□□□□ -2.11
LSM1O15116 HSBP1P1-201ENST00000555205 166 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AC025678.1-201ENST00000567861 338 ntBASIC1.85□□□□□ -2.11
LSM1O15116 DEFB122-202ENST00000569013 197 ntBASIC1.85□□□□□ -2.11
LSM1O15116 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM1O15116 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM1O15116 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM1O15116 AC008121.3-201ENST00000618726 433 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AC017037.3-201ENST00000625016 472 ntBASIC1.85□□□□□ -2.11
LSM1O15116 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.85□□□□□ -2.11
LSM1O15116 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LSM1O15116 RNU6-487P-201ENST00000365430 104 ntBASIC1.84□□□□□ -2.11
LSM1O15116 RNU1-57P-201ENST00000384491 166 ntBASIC1.84□□□□□ -2.11
LSM1O15116 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LSM1O15116 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
LSM1O15116 RN7SKP223-201ENST00000410582 62 ntBASIC1.84□□□□□ -2.11
LSM1O15116 MTCO2P23-201ENST00000425216 680 ntBASIC1.84□□□□□ -2.11
LSM1O15116 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.84□□□□□ -2.11
LSM1O15116 IFNA20P-201ENST00000436840 528 ntBASIC1.84□□□□□ -2.11
LSM1O15116 AC004854.1-201ENST00000440356 349 ntBASIC1.84□□□□□ -2.11
LSM1O15116 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms