Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RNU6-654P-201ENST00000364373 107 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 MIR767-201ENST00000390228 109 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
CACNA1AO00555 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1AO00555 MRPL35P3-201ENST00000421557 364 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.37□□□□□ -2.35
CACNA1AO00555 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CACNA1AO00555 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1AO00555 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.37□□□□□ -2.35
CACNA1AO00555 RNU6-420P-201ENST00000458780 107 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 OR2A41P-201ENST00000473586 105 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.37□□□□□ -2.35
CACNA1AO00555 RNU6-1121P-201ENST00000516802 109 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 OR5AK1P-201ENST00000524837 922 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1AO00555 AC010615.3-201ENST00000597319 394 ntBASIC0.37□□□□□ -2.35
CACNA1AO00555 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.37□□□□□ -2.35
CACNA1AO00555 Y_RNA.311-201ENST00000365068 96 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 RNU6-920P-201ENST00000410926 92 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 RNU4-63P-201ENST00000411313 118 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL356320.2-201ENST00000417263 507 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL109913.1-201ENST00000421173 514 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 NDUFA5P10-201ENST00000432147 357 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 HSPE1P21-201ENST00000438283 308 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 PNPLA4P1-201ENST00000458328 305 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 RPS27P22-201ENST00000478056 241 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 UBE2Q2P9-201ENST00000490086 202 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 UBL5P1-201ENST00000507979 193 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 RNU6-362P-201ENST00000516736 90 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 EIF4EP5-201ENST00000528228 640 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 MIR3921-201ENST00000577308 85 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 MIR4504-201ENST00000577413 92 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AC115085.1-201ENST00000588924 229 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 ZNF92P3-201ENST00000596594 954 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC025165.5-201ENST00000602802 578 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL356585.4-201ENST00000623078 1229 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 PRRC2CP1-201ENST00000404428 159 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL356131.1-201ENST00000405826 414 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 RNA5SP451-201ENST00000410588 110 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.36□□□□□ -2.35
CACNA1AO00555 BTF3P11-201ENST00000426582 477 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.36□□□□□ -2.35
CACNA1AO00555 DYNLT3P2-201ENST00000442517 295 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.36□□□□□ -2.35
CACNA1AO00555 U8.21-201ENST00000459536 136 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC087884.1-201ENST00000469738 328 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC027575.1-201ENST00000481064 460 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AF213884.2-201ENST00000510417 903 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.36□□□□□ -2.35
CACNA1AO00555 AC010186.2-204ENST00000537668 439 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AL133241.1-201ENST00000556832 487 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AGGF1P5-201ENST00000567900 919 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 SNORD14A-201ENST00000606526 91 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 AC068880.5-201ENST00000624331 290 ntBASIC0.36□□□□□ -2.35
CACNA1AO00555 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.36□□□□□ -2.35
CACNA1AO00555 ZNF29P-201ENST00000225587 168 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 MIR147B-201ENST00000390185 80 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 AC023512.1-201ENST00000444513 499 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC079448.1-201ENST00000449377 373 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 RNU7-23P-201ENST00000459465 62 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC107626.1-201ENST00000471084 183 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 AC111000.5-201ENST00000506559 1178 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 AC004852.3-201ENST00000614131 326 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC025588.4-201ENST00000615802 908 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AP002791.1-201ENST00000623291 381 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.35□□□□□ -2.35
CACNA1AO00555 AL136372.1-201ENST00000403060 228 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 Y_RNA.630-201ENST00000411370 108 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.35□□□□□ -2.35
CACNA1AO00555 COX7A2P2-201ENST00000505291 250 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CACNA1AO00555 RNU5F-8P-201ENST00000515941 111 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC034114.1-201ENST00000520293 285 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AP003049.1-201ENST00000529418 457 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AC090616.3-201ENST00000582184 217 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 AL009028.1-201ENST00000604895 802 ntBASIC0.35□□□□□ -2.35
CACNA1AO00555 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.35□□□□□ -2.35
CACNA1AO00555 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
CACNA1AO00555 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CACNA1AO00555 RNA5SP361-201ENST00000362686 118 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 RNU5D-1-201ENST00000363299 116 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 AL049737.1-201ENST00000413920 1403 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 AL606490.4-201ENST00000423117 127 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 AL359385.1-201ENST00000456509 365 ntBASIC0.34□□□□□ -2.35
CACNA1AO00555 RPL31P53-201ENST00000457065 348 ntBASIC0.34□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms