Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SCARNA17.4-201ENST00000614296 143 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC072046.2-201ENST00000618366 268 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.33□□□□□ -2.04
PDLIM1O00151 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.33□□□□□ -2.04
PDLIM1O00151 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
PDLIM1O00151 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PDLIM1O00151 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.33□□□□□ -2.04
PDLIM1O00151 AL359851.1-201ENST00000569460 4997 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC004520.1-201ENST00000608362 1413 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 AC004944.1-201ENST00000517807 3059 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 MTND4P1-201ENST00000457501 1466 ntBASIC2.33□□□□□ -2.04
PDLIM1O00151 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PDLIM1O00151 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PDLIM1O00151 OR56A5-201ENST00000340110 738 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 RNU6-395P-201ENST00000365662 106 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PDLIM1O00151 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.32□□□□□ -2.04
PDLIM1O00151 GPR143P-201ENST00000434155 205 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AC079781.2-201ENST00000446424 169 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 RPL31P3-201ENST00000458430 332 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 ARL2BPP4-201ENST00000506854 471 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 RBBP4P6-201ENST00000508098 202 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.32□□□□□ -2.04
PDLIM1O00151 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 BTF3P12-201ENST00000519620 469 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 MTCYBP20-201ENST00000524239 1129 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 OR5AQ1P-201ENST00000527596 927 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.32□□□□□ -2.04
PDLIM1O00151 MIR3913-1-201ENST00000577744 102 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
PDLIM1O00151 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.32□□□□□ -2.04
PDLIM1O00151 AC006023.1-201ENST00000603944 259 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
PDLIM1O00151 AC025034.2-201ENST00000623264 286 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AL157786.1-207ENST00000627771 695 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 U6.114-201ENST00000636407 96 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.32□□□□□ -2.04
PDLIM1O00151 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.32□□□□□ -2.04
PDLIM1O00151 AC103710.2-202ENST00000641454 2853 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
PDLIM1O00151 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PDLIM1O00151 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PDLIM1O00151 Y_RNA.77-201ENST00000362962 107 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 RNU6-1280P-201ENST00000365211 107 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 RNU6-1083P-201ENST00000384022 107 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 SNORD116-2-201ENST00000384274 95 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 SNORD116-6-201ENST00000384711 96 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 RNU6-19P-201ENST00000384718 107 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 UBE2V1P2-201ENST00000397758 440 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.31□□□□□ -2.04
PDLIM1O00151 OR51A5P-201ENST00000415429 942 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 MTND3P17-201ENST00000416968 344 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 PIGFP2-201ENST00000421400 651 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AL160275.3-201ENST00000423876 471 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 MTCO3P30-201ENST00000426425 670 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.31□□□□□ -2.04
PDLIM1O00151 AL078601.1-201ENST00000444542 271 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC092001.1-201ENST00000453012 261 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.31□□□□□ -2.04
PDLIM1O00151 RNU5F-8P-201ENST00000515941 111 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 SNORD19.2-201ENST00000516978 73 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.31□□□□□ -2.04
PDLIM1O00151 RANP3-201ENST00000530970 276 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.31□□□□□ -2.04
PDLIM1O00151 AC023824.2-201ENST00000566185 400 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC012213.3-201ENST00000577199 777 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.31□□□□□ -2.04
PDLIM1O00151 MIR4658-201ENST00000584344 65 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.31□□□□□ -2.04
PDLIM1O00151 DEFB131E-202ENST00000602581 683 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC006566.1-201ENST00000608943 513 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 AC010329.5-201ENST00000623497 2174 ntBASIC2.31□□□□□ -2.04
PDLIM1O00151 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
PDLIM1O00151 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDLIM1O00151 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.3□□□□□ -2.04
PDLIM1O00151 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.3□□□□□ -2.04
PDLIM1O00151 RNU6-61P-201ENST00000365528 109 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 RNU6-898P-201ENST00000365627 104 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 SNORD116-9-201ENST00000384000 95 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 SNORD116-3-201ENST00000384287 95 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 SNORD116-7-201ENST00000384404 95 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 SNORD116-5-201ENST00000384462 95 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 Y_RNA.553-201ENST00000384670 102 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 RNU6-1072P-201ENST00000384703 107 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 RNU6-443P-201ENST00000384780 107 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 MIR147B-201ENST00000390185 80 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 SNORA40C-201ENST00000391285 128 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.3□□□□□ -2.04
PDLIM1O00151 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.3□□□□□ -2.04
PDLIM1O00151 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.3□□□□□ -2.04
PDLIM1O00151 ARL5AP4-201ENST00000430731 512 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.3□□□□□ -2.04
PDLIM1O00151 MYL8P-204ENST00000431574 518 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.3□□□□□ -2.04
PDLIM1O00151 MTCO2P16-201ENST00000436962 677 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 IFNA11P-201ENST00000446352 526 ntBASIC2.3□□□□□ -2.04
PDLIM1O00151 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms