Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RN7SKP132-201ENST00000516001 208 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 MIR514B-201ENST00000516774 80 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RNU6-667P-201ENST00000517186 102 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC021269.2-201ENST00000532318 330 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC234772.3-201ENST00000602277 528 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AL096840.1-201ENST00000603287 93 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AL451064.1-201ENST00000607718 471 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC004223.4-201ENST00000612426 332 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 MIR6766-201ENST00000622641 72 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC034229.5-201ENST00000624258 185 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC092608.2-201ENST00000624427 218 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 MIR1291-201ENST00000627649 87 ntBASIC1.64□□□□□ -2.15
SMKR1H3BMG3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.64□□□□□ -2.15
SMKR1H3BMG3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RNY1P12-201ENST00000364251 105 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RNU6-384P-201ENST00000364900 104 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RNA5SP138-201ENST00000365098 114 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RNU6-301P-201ENST00000384277 107 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 MIR34B-201ENST00000385076 84 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RPS3AP36-201ENST00000398190 775 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AL359511.1-201ENST00000402970 211 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AL591416.1-201ENST00000404015 867 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RNU2-23P-201ENST00000410545 195 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RNA5SP111-201ENST00000411386 101 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 HMGB3P2-201ENST00000411913 584 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC011233.1-201ENST00000422812 283 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 FTH1P2-201ENST00000466086 412 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC006512.1-201ENST00000468816 291 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AL121594.1-201ENST00000475906 575 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 MRPS17P9-201ENST00000511924 393 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 SNORA43.2-201ENST00000516652 128 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AP000763.2-201ENST00000540641 163 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 RPL21P5-201ENST00000554662 472 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC090897.2-201ENST00000581715 130 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC008521.1-201ENST00000587471 187 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC008739.3-201ENST00000603262 127 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC005034.5-201ENST00000604219 466 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AL137790.1-201ENST00000634283 177 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC099654.13-201ENST00000639774 207 ntBASIC1.63□□□□□ -2.15
SMKR1H3BMG3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
SMKR1H3BMG3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 Y_RNA.22-201ENST00000362492 102 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RNU6-371P-201ENST00000364283 108 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RNA5SP160-201ENST00000364866 120 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 SNORA72.3-201ENST00000365074 132 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RNU6-61P-201ENST00000365528 109 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 CBX3P9-201ENST00000402326 552 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RNU2-48P-201ENST00000410694 191 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 UBE2D3P4-201ENST00000441973 436 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL360271.2-201ENST00000447710 161 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC104058.1-201ENST00000448028 297 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL021397.1-201ENST00000451806 248 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 snoU13.14-201ENST00000459372 104 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC109486.1-201ENST00000486833 374 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RBBP4P6-201ENST00000508098 202 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 RN7SKP265-201ENST00000516448 223 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AC022616.3-201ENST00000523940 148 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 CYCSP27-201ENST00000527643 293 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 BNIP3P6-201ENST00000549284 499 ntBASIC1.62□□□□□ -2.15
SMKR1H3BMG3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms