Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC103710.2-202ENST00000641454 2853 ntBASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
NPIPA2E9PIF3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 RNU6-61P-201ENST00000365528 109 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 SNORA75B-201ENST00000384053 137 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MIR27B-201ENST00000385129 97 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MIR524-201ENST00000385242 87 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 SNORA40C-201ENST00000391285 128 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AL160275.3-201ENST00000423876 471 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AL078601.1-201ENST00000444542 271 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AL583843.1-201ENST00000456070 346 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AL441985.1-201ENST00000457727 251 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MRPL42P6-201ENST00000486397 371 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 RN7SKP24-201ENST00000515888 284 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC010186.2-204ENST00000537668 439 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC243972.3-201ENST00000539655 198 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AP002770.2-201ENST00000543613 532 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC025678.1-201ENST00000567861 338 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MIR5092-201ENST00000583139 88 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 NRBF2P1-201ENST00000587407 859 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC008521.1-201ENST00000587471 187 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC010620.1-201ENST00000601088 1102 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 MIR6134-201ENST00000617606 109 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC093648.1-201ENST00000623546 606 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AL359854.1-201ENST00000614203 1594 ntBASIC2.3□□□□□ -2.04
NPIPA2E9PIF3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 CDC27P3-201ENST00000635418 1910 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 RNU6-179P-201ENST00000363350 107 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 RNU6-282P-201ENST00000365357 103 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 RNU6-395P-201ENST00000365662 106 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 RNU6-166P-201ENST00000384371 107 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 MIR218-1-201ENST00000384999 110 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 MTND3P17-201ENST00000416968 344 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC009963.1-201ENST00000417265 157 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 CR769767.1-201ENST00000436337 346 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 FABP5P14-201ENST00000437273 393 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 CACYBPP2-201ENST00000453625 678 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 BTF3P15-201ENST00000455606 336 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC022493.1-201ENST00000492984 337 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC116655.1-201ENST00000508324 901 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 SNORA31.11-201ENST00000516528 139 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 SNORD53-201ENST00000579969 78 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AC110760.3-201ENST00000598794 467 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AL356575.1-201ENST00000603008 283 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AL590808.1-201ENST00000618696 141 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 CTSLP2-204ENST00000629029 392 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AL109809.4-201ENST00000603520 2185 ntBASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.29□□□□□ -2.04
NPIPA2E9PIF3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 SNORD3E-201ENST00000362899 217 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 RNU6-486P-201ENST00000363116 107 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 RNU6-748P-201ENST00000384648 107 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 MIR1-2-201ENST00000384961 85 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 BX276092.3-201ENST00000424182 230 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 Z98742.2-201ENST00000431564 187 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 GPR143P-201ENST00000434155 205 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AC004383.1-201ENST00000438135 289 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 KATNBL1P3-201ENST00000443475 909 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 IFNA11P-201ENST00000446352 526 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AC003071.1-201ENST00000451219 789 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 RNU6-956P-201ENST00000458868 103 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 MTCO3P28-201ENST00000513351 515 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 RNA5SP112-201ENST00000515937 99 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 RNU6-410P-201ENST00000517006 107 ntBASIC2.28□□□□□ -2.04
NPIPA2E9PIF3 OR5AL2P-201ENST00000532185 920 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms