Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC022336.2-201ENST00000568966 2538 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.26-201ENST00000362539 101 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 RNU1-32P-201ENST00000363937 159 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.477-201ENST00000384352 108 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 Y_RNA.518-201ENST00000384552 113 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 MIR591-201ENST00000385290 95 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AL591034.2-201ENST00000402839 359 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 CYCSP33-201ENST00000414485 327 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC139712.2-201ENST00000424302 339 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 MTND4LP30-201ENST00000454092 297 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 UQCRHP4-201ENST00000471686 272 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 RPL7P47-201ENST00000497299 556 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 RNU6-1256P-201ENST00000516539 103 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 TRAV32-201ENST00000553993 340 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 GNRHR2P1-201ENST00000555315 631 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC090517.1-201ENST00000569307 266 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC004584.2-201ENST00000570407 410 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC025627.2-201ENST00000576220 160 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 MIR4644-201ENST00000579929 84 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 MIR8059-201ENST00000620427 81 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC130454.1-201ENST00000622948 401 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.2□□□□□ -1.9
CGB1A6NKQ9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
CGB1A6NKQ9 LINC02471-203ENST00000641941 4752 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC007656.2-201ENST00000624902 4547 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-806P-201ENST00000365147 105 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-741P-201ENST00000383889 107 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 MIR628-201ENST00000385229 95 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AL513475.1-201ENST00000406602 315 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 DNAJC19P7-201ENST00000428811 344 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU7-169P-201ENST00000459456 61 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC133134.1-201ENST00000466800 359 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 FO393415.2-201ENST00000480085 343 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC105137.1-201ENST00000484355 562 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC025465.3-201ENST00000510570 311 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC093840.1-201ENST00000511599 336 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-927P-201ENST00000516199 100 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-143P-201ENST00000516942 93 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 RNU6-897P-201ENST00000517135 105 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 CYCSP29-201ENST00000533731 318 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 CPDP1-201ENST00000579660 283 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 MIR3976-201ENST00000606807 139 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AL445567.2-201ENST00000618935 498 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 SDR42E1P4-201ENST00000620894 481 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 U6.98-201ENST00000637157 84 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 MTND5P6-201ENST00000422338 1798 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 FAM35BP-202ENST00000497389 3337 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CGB1A6NKQ9 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
CGB1A6NKQ9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 SNORA60-201ENST00000362396 134 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 U8.8-201ENST00000365399 135 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 HSPE1P12-201ENST00000412576 301 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC007098.1-201ENST00000420122 367 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 RPL18P10-201ENST00000425606 538 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AL451062.2-201ENST00000427515 271 ntBASIC3.18□□□□□ -1.9
CGB1A6NKQ9 AC087650.1-201ENST00000431445 468 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms