Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC023141.4-201ENST00000412031 328 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC012308.1-201ENST00000451232 178 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 SNORD19B-201ENST00000459623 84 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 HMGN1P13-201ENST00000505795 138 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC116655.1-201ENST00000508324 901 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 RNA5SP154-201ENST00000516193 111 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AL139395.1-201ENST00000603662 160 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AL050343.2-201ENST00000607338 280 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC135507.2-201ENST00000612443 309 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AL442067.2-201ENST00000614033 363 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 MIR8058-201ENST00000615737 89 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 PISRT1.1-201ENST00000616930 107 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC126177.8-201ENST00000618339 1015 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC138627.2-201ENST00000624202 601 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC119674.1-207ENST00000641355 633 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 AC010680.1-201ENST00000590024 3590 ntBASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.27□□□□□ -1.89
MBD3L4A6NDZ8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RNU6-1317P-201ENST00000364582 104 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 Y_RNA.813-201ENST00000364639 102 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RHOT1P2-201ENST00000366423 333 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 Y_RNA.419-201ENST00000384041 102 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 SNORD116-20-201ENST00000384529 92 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RNVU1-14-201ENST00000384770 164 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MIR767-201ENST00000390228 109 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RNA5SP306-201ENST00000411087 107 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC004552.1-201ENST00000419089 348 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC245291.1-201ENST00000419501 328 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AL353748.1-201ENST00000440753 474 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AL161651.1-201ENST00000440882 223 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RPL21P23-201ENST00000446654 460 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 U8.21-201ENST00000459536 136 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 RPS26P3-201ENST00000470205 348 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC090543.2-201ENST00000483963 348 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC004057.1-201ENST00000485827 348 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MRPL42P6-201ENST00000486397 371 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC025445.1-201ENST00000502728 300 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 SNORD59.2-201ENST00000516873 68 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 APOOP3-201ENST00000536787 586 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MIR5195-201ENST00000583555 115 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC024153.1-201ENST00000603103 365 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC008638.3-201ENST00000603341 463 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
MBD3L4A6NDZ8 AC004944.1-201ENST00000517807 3059 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 MTND4P23-201ENST00000447723 1363 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 KPNA2P1-201ENST00000458289 1591 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AC091152.2-201ENST00000591628 2569 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RPL9P7-201ENST00000330965 580 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 SNORD9-201ENST00000362566 104 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RNU6-942P-201ENST00000363002 107 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RNU6-336P-201ENST00000364891 107 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 Y_RNA.431-201ENST00000384086 102 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 Y_RNA.473-201ENST00000384333 102 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 SNORD116-29-201ENST00000384516 83 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RNY4P36-201ENST00000391116 96 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RNU6-954P-201ENST00000411355 107 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AC017083.1-201ENST00000428093 483 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 Z82205.1-201ENST00000428456 297 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 CYCSP35-201ENST00000451978 304 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RPL9P9-202ENST00000466501 579 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
MBD3L4A6NDZ8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms