Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPS3AP23-202ENST00000574601 686 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AL020997.2-201ENST00000602607 184 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AL132765.2-201ENST00000610812 351 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AL138726.1-201ENST00000614873 333 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 MIR7112-201ENST00000616126 65 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AL133216.2-202ENST00000634512 349 ntBASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV7S3A2A0A539 AC066616.2-201ENST00000559334 1481 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AC010680.1-201ENST00000590024 3590 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 Y_RNA.184-201ENST00000363884 108 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AL356967.1-201ENST00000406305 431 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 HMGN2P30-201ENST00000423237 256 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 RPL32P28-201ENST00000443577 397 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AC109925.1-201ENST00000478069 331 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 RN7SL283P-201ENST00000489055 303 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-1088P-201ENST00000516850 104 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 RNU6-1183P-201ENST00000517054 60 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 H3F3AP1-201ENST00000559984 334 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 CYCSP39-201ENST00000565821 309 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AC100830.2-201ENST00000581636 240 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 APOOP1-201ENST00000604695 592 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AC087045.1-201ENST00000605856 382 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AL359697.1-201ENST00000624879 587 ntBASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV7S3A2A0A539 AL021368.2-201ENST00000606125 5352 ntBASIC3.09□□□□□ -1.92
TCRBV7S3A2A0A539 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.09□□□□□ -1.92
TCRBV7S3A2A0A539 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 MTND5P7-201ENST00000413558 1798 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 GABRG2-229ENST00000641017 3628 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.61-201ENST00000362835 102 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-1252P-201ENST00000363054 104 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 SNORD116-11-201ENST00000383882 92 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 SNORA54-201ENST00000384281 123 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.529-201ENST00000384586 119 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 RNA5SP38-201ENST00000410750 119 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AL353729.1-201ENST00000425044 720 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC007560.1-201ENST00000426912 237 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 HMGB1P9-201ENST00000429856 646 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 MTND3P23-201ENST00000431980 347 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AL359672.1-201ENST00000442302 409 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 RPL37P4-201ENST00000448908 268 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AP004217.1-201ENST00000480579 346 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-323P-201ENST00000521915 107 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AL391261.3-201ENST00000557194 520 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 MIR5047-201ENST00000579212 100 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 AC103710.3-201ENST00000608157 948 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV7S3A2A0A539 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 Y_RNA.339-201ENST00000365325 102 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 SNORD6-201ENST00000365444 73 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 Z98749.2-208ENST00000381646 500 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AL360182.1-201ENST00000397433 468 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-1077P-201ENST00000410506 102 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AL096701.2-201ENST00000416920 238 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AL714022.1-201ENST00000439897 151 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 RNU6-566P-201ENST00000516790 107 ntBASIC3.07□□□□□ -1.92
TCRBV7S3A2A0A539 RNA5SP454-201ENST00000517231 127 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms