Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 PISRT1-201ENST00000626175 531 ntBASIC2.21□□□□□ -2.06
SMIM28A0A1B0GU29 TEX21P-201ENST00000447107 1476 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-461P-201ENST00000364195 107 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RNU4-91P-201ENST00000364778 135 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-750P-201ENST00000390946 107 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MIR1302-8-201ENST00000408342 128 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC127391.1-201ENST00000411737 98 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC027124.2-201ENST00000428249 105 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MED13P1-201ENST00000428342 171 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 HMGB1P9-201ENST00000429856 646 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 USP9YP29-201ENST00000445112 563 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 DPPA3P1-201ENST00000448050 469 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 FDX1P2-201ENST00000450769 375 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MTATP6P7-201ENST00000453315 681 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AL033528.1-201ENST00000453780 140 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 GZMAP1-201ENST00000503054 631 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MTND4P2-201ENST00000507767 1203 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC108078.2-201ENST00000510750 236 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MTCO3P28-201ENST00000513351 515 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 Vault.3-201ENST00000516676 95 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-1183P-201ENST00000517054 60 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MTND2P38-201ENST00000522536 667 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AP002453.2-201ENST00000533503 320 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC005261.5-201ENST00000596280 355 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC012409.4-201ENST00000612923 249 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AL133173.2-201ENST00000614270 90 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 YWHAEP7-203ENST00000622054 312 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 MIR7843-201ENST00000622274 79 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 Z69908.1-201ENST00000622603 247 ntBASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
SMIM28A0A1B0GU29 ZNF271P-202ENST00000465539 1970 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC010889.1-201ENST00000566193 2666 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 Y_RNA.201-201ENST00000364052 96 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-348P-201ENST00000384386 107 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC137499.1-201ENST00000427602 88 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL591704.1-201ENST00000432574 275 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 MTATP6P16-201ENST00000434543 526 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC073614.1-201ENST00000438690 650 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL445687.1-201ENST00000439946 251 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC244505.5-201ENST00000443639 207 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 HMGN2P10-201ENST00000448085 265 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC079448.1-201ENST00000449377 373 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 FABP5P13-201ENST00000452144 328 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 snoU109.1-201ENST00000459339 135 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC117522.2-201ENST00000510049 657 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC022447.1-201ENST00000515358 464 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 SNORA31.6-201ENST00000516241 130 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC025755.1-201ENST00000521306 278 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL356057.1-201ENST00000533798 831 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL157871.3-201ENST00000557231 293 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AP005136.1-201ENST00000579765 429 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AL355598.1-201ENST00000604169 202 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 AC103710.2-202ENST00000641454 2853 ntBASIC2.19□□□□□ -2.06
SMIM28A0A1B0GU29 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 ELL2P3-201ENST00000457883 1602 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 AC073343.1-201ENST00000328239 651 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 SNORD3E-201ENST00000362899 217 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RN7SKP226-201ENST00000364912 300 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-282P-201ENST00000365357 103 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 RNU6-61P-201ENST00000365528 109 ntBASIC2.18□□□□□ -2.06
SMIM28A0A1B0GU29 Y_RNA.367-201ENST00000365544 101 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms