Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AC114801.2-201ENST00000503825 781 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 FAM206BP-201ENST00000510179 541 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC117532.1-201ENST00000514638 323 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-150P-201ENST00000516237 95 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-667P-201ENST00000517186 102 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC009902.1-201ENST00000519351 183 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC090821.2-201ENST00000523552 176 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AP004247.1-201ENST00000531556 1289 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC004987.4-201ENST00000603383 338 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC016925.2-201ENST00000605108 242 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC087045.1-201ENST00000605856 382 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC090186.1-201ENST00000605991 572 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC098614.4-201ENST00000607601 462 ntBASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.01□□□□□ -2.25
TRAV1-1A0A0B4J248 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 MTND5P33-201ENST00000571250 1450 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 ZNF29P-201ENST00000225587 168 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU1-17P-201ENST00000363022 152 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-1032P-201ENST00000384100 107 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-611P-201ENST00000384276 104 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR1262-201ENST00000408276 93 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU2-41P-201ENST00000410991 178 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AL953862.1-201ENST00000423016 168 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 ZNF736P7Y-201ENST00000425158 820 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 RPL23AP76-201ENST00000441860 458 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 MTND4P2-201ENST00000507767 1203 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 DUXAP5-201ENST00000529668 529 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AL132657.2-201ENST00000564417 358 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AC023825.1-201ENST00000566704 1030 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AC060771.1-201ENST00000582031 164 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR4293-201ENST00000584305 78 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 CLIC4P2-201ENST00000601934 717 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AL050343.2-201ENST00000607338 280 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AL132822.1-201ENST00000617063 513 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 U1.36-201ENST00000620684 176 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AC091965.5-201ENST00000624785 342 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 AP003485.1-201ENST00000625093 753 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 U6.99-201ENST00000637524 83 ntBASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1□□□□□ -2.25
TRAV1-1A0A0B4J248 ZNF680P1-201ENST00000436625 1469 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR19A-201ENST00000384878 82 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AL133475.1-201ENST00000404414 305 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AL022400.1-201ENST00000423946 935 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC108729.3-201ENST00000513484 108 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC109329.1-201ENST00000518744 317 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AP003033.1-201ENST00000527244 415 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR4782-201ENST00000577987 79 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 RPL30P11-203ENST00000598995 310 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AL512598.1-201ENST00000610158 273 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 RMST_6.1-201ENST00000611980 203 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 AC099654.9-201ENST00000637055 678 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.99□□□□□ -2.25
TRAV1-1A0A0B4J248 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-1164P-201ENST00000364428 107 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR30A-201ENST00000385092 71 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 RNA5SP501-201ENST00000410990 112 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU7-59P-201ENST00000459101 61 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 RPL37P6-201ENST00000460682 294 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AL163540.1-201ENST00000485382 386 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU1-92P-201ENST00000517017 135 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 RNU6-586P-201ENST00000517265 104 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AP003355.1-201ENST00000518956 587 ntBASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV1-1A0A0B4J248 COPS8P3-201ENST00000526024 482 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms