Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL714022.1-201ENST00000439897 151 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 NIPA2P5-201ENST00000452282 464 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC092436.3-201ENST00000511788 257 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AP005597.4-201ENST00000526762 229 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 SRGNP1-201ENST00000603392 451 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC007179.3-201ENST00000604976 235 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-6P-201ENST00000606623 107 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AL161629.2-201ENST00000615347 275 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AL355365.1-201ENST00000616480 294 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR3199-2-201ENST00000636243 86 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC006504.1-201ENST00000562493 3666 ntBASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHGA3Q9Y5H0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU4-79P-201ENST00000362764 141 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-1297P-201ENST00000384415 104 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AL445529.1-201ENST00000398713 389 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AL035423.1-201ENST00000420331 213 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 MTCO2P27-201ENST00000420740 428 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 SAR1AP4-201ENST00000429225 591 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AL159987.2-201ENST00000432754 307 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 RPS3AP52-201ENST00000435639 297 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 HMGN2P10-201ENST00000448085 265 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC026726.1-201ENST00000512859 601 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC010186.2-204ENST00000537668 439 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 POLR3GP2-201ENST00000588366 668 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 U6.98-201ENST00000637157 84 ntBASIC3.66□□□□□ -1.82
PCDHGA3Q9Y5H0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGA3Q9Y5H0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHGA3Q9Y5H0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
PCDHGA3Q9Y5H0 SNORD62.1-201ENST00000362541 86 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU4-76P-201ENST00000364509 141 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC245291.1-201ENST00000419501 328 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 HMGN2P31-201ENST00000432430 273 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC125238.1-201ENST00000448842 249 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 RPL23AP45-201ENST00000476406 468 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC106707.2-201ENST00000484182 374 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-377P-201ENST00000515965 102 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR5690-201ENST00000583739 73 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AL451007.1-201ENST00000595491 289 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC024153.1-201ENST00000603103 365 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 AC090574.1-201ENST00000623186 233 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 ADAM3A-203ENST00000461344 2157 ntBASIC3.65□□□□□ -1.83
PCDHGA3Q9Y5H0 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RNA5SP72-201ENST00000364442 117 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 Z98749.2-208ENST00000381646 500 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RNU6-95P-201ENST00000384697 107 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 MIR183-201ENST00000384958 110 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RPS29P4-201ENST00000414733 161 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RPL7P37-201ENST00000425095 738 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 RPL23AP14-201ENST00000468281 468 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC114801.2-201ENST00000503825 781 ntBASIC3.64□□□□□ -1.83
PCDHGA3Q9Y5H0 AC110768.1-201ENST00000509222 400 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms