Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC012213.3-201ENST00000577199 777 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC112220.3-201ENST00000605502 502 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL359821.1-201ENST00000605519 182 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AL589994.2-201ENST00000621124 579 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 MIR6767-201ENST00000637302 66 ntBASIC0.43□□□□□ -2.34
AP4S1Q9Y587 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
AP4S1Q9Y587 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
AP4S1Q9Y587 MIR10B-201ENST00000385011 110 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.42□□□□□ -2.34
AP4S1Q9Y587 AL353706.1-201ENST00000436728 494 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.42□□□□□ -2.34
AP4S1Q9Y587 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.42□□□□□ -2.34
AP4S1Q9Y587 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.42□□□□□ -2.34
AP4S1Q9Y587 RNU6-491P-201ENST00000516099 110 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 CYCSP23-201ENST00000519781 313 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.42□□□□□ -2.34
AP4S1Q9Y587 AC079598.5-201ENST00000547460 117 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 MIR4524B-201ENST00000581569 115 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 WISP1-OT1-201ENST00000602893 642 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 AC024257.5-201ENST00000612739 531 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 AC104820.1-201ENST00000624183 307 ntBASIC0.42□□□□□ -2.34
AP4S1Q9Y587 AC138393.1-203ENST00000327086 343 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 AC092634.6-201ENST00000418558 192 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 PPP1R11P2-201ENST00000423543 382 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 PTGES3P4-201ENST00000426243 356 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 Z82205.1-201ENST00000428456 297 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.41□□□□□ -2.34
AP4S1Q9Y587 MTND1P18-201ENST00000448191 573 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 MTCO3P2-201ENST00000457365 171 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 RNA5SP458-201ENST00000516188 119 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.41□□□□□ -2.34
AP4S1Q9Y587 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.41□□□□□ -2.34
AP4S1Q9Y587 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.41□□□□□ -2.34
AP4S1Q9Y587 SUB1P4-201ENST00000566062 339 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.41□□□□□ -2.34
AP4S1Q9Y587 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
AP4S1Q9Y587 AC095038.3-201ENST00000634439 195 ntBASIC0.41□□□□□ -2.34
AP4S1Q9Y587 GDI2P1-201ENST00000429312 1336 ntBASIC0.4□□□□□ -2.34
AP4S1Q9Y587 SNORD33-201ENST00000362761 85 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RNU6-17P-201ENST00000384245 107 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RNU6-18P-201ENST00000384527 107 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RPL23AP32-201ENST00000395315 459 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 MRPL35P1-201ENST00000404272 572 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RNU2-68P-201ENST00000410878 191 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC114482.1-201ENST00000418010 247 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AL353621.1-201ENST00000418219 243 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RPS26P5-201ENST00000418544 335 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RPS15AP12-201ENST00000419498 388 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 OR2AQ1P-201ENST00000451972 200 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC112771.1-201ENST00000463581 102 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 RPL26P26-201ENST00000480251 434 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 BET1P1-201ENST00000482276 359 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC134050.1-201ENST00000495088 933 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AF131216.2-201ENST00000512316 564 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 PTP4A1P4-201ENST00000512479 322 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.4□□□□□ -2.35
AP4S1Q9Y587 MZT1P2-201ENST00000604387 248 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC009229.3-201ENST00000608056 282 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.4□□□□□ -2.35
AP4S1Q9Y587 AC017037.3-201ENST00000625016 472 ntBASIC0.4□□□□□ -2.35
AP4S1Q9Y587 SNORA51.6-201ENST00000384151 125 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 MIR605-201ENST00000385078 83 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 JTBP1-201ENST00000441314 247 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AC108059.3-201ENST00000456388 214 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 CYP4A27P-201ENST00000567218 190 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AC109446.2-201ENST00000567872 497 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 CLIC4P2-201ENST00000601934 717 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AC016727.1-205ENST00000605437 569 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.39□□□□□ -2.35
AP4S1Q9Y587 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.39□□□□□ -2.35
AP4S1Q9Y587 NACAP2-201ENST00000318548 624 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 RNU6-1339P-201ENST00000363574 91 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 MIR19B1-201ENST00000384829 87 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AP000275.1-201ENST00000411943 390 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 MTCO3P5-201ENST00000433620 714 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 RPL23AP35-201ENST00000451906 501 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 COX7A2P2-201ENST00000505291 250 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 TRMT112P2-201ENST00000512910 132 ntBASIC0.38□□□□□ -2.35
AP4S1Q9Y587 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.38□□□□□ -2.35
AP4S1Q9Y587 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms