Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MIR514A1-201ENST00000385133 98 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC083875.1-201ENST00000419509 405 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 FO393419.3-201ENST00000428741 282 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 RAB11AP1-201ENST00000442978 646 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 HMGN3P1-201ENST00000453847 193 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AL049874.1-201ENST00000489560 388 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC025459.1-201ENST00000504072 156 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 NRON-201ENST00000517270 370 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC110491.1-201ENST00000562191 2010 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 MTCO2P2-201ENST00000591258 225 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AL713866.2-201ENST00000603579 219 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 ELOCP5-201ENST00000604924 333 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AL022345.2-201ENST00000606307 135 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 BX284668.6-201ENST00000606899 438 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC073569.3-201ENST00000619055 682 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC027335.2-201ENST00000624030 375 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AC091965.5-201ENST00000624785 342 ntBASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.34□□□□□ -2.36
UBE2D4Q9Y2X8 MTND5P31-201ENST00000419366 1374 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 Z75746.1-201ENST00000440243 2080 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 MIR608-201ENST00000384820 100 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 FTH1P15-201ENST00000406984 280 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC078974.1-201ENST00000411597 223 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 PNRC2P1-201ENST00000423940 420 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AL512637.2-201ENST00000431287 1256 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 UBE2V1P5-201ENST00000440070 405 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC245102.2-201ENST00000448956 180 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 RFC5P1-201ENST00000454419 874 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC087477.1-201ENST00000465747 340 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-229P-201ENST00000516614 102 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-197P-201ENST00000516680 100 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 SNORD19.2-201ENST00000516978 73 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 CYCSP27-201ENST00000527643 293 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC016957.1-201ENST00000534895 309 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 SNORA4-201ENST00000584302 138 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC005261.5-201ENST00000596280 355 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 BNIP3P23-201ENST00000599655 511 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 BBIP1P1-201ENST00000602999 279 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC069304.2-201ENST00000605154 435 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 AC009318.4-201ENST00000620496 486 ntBASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.33□□□□□ -2.36
UBE2D4Q9Y2X8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-414P-201ENST00000363705 104 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 SNORA25-201ENST00000384384 134 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AL591034.2-201ENST00000402839 359 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AC097463.2-201ENST00000421074 142 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AC114737.2-201ENST00000421583 173 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AC018630.2-202ENST00000422992 927 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AL445305.1-201ENST00000432577 575 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 NANOGP2-201ENST00000435391 727 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 THAP5P1-201ENST00000439089 262 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AC134050.1-201ENST00000495088 933 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 COPS8P3-201ENST00000526024 482 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 MIR3937-201ENST00000580135 106 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AL022345.1-201ENST00000607292 135 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 RMST_2.1-201ENST00000617263 136 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 OR4G3P-201ENST00000633500 913 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 U6.107-201ENST00000637108 79 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AC092125.1-201ENST00000562568 1995 ntBASIC0.32□□□□□ -2.36
UBE2D4Q9Y2X8 AL138713.1-201ENST00000624026 2130 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-741P-201ENST00000383889 107 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 RNU6-1151P-201ENST00000384684 107 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 SNORA48.1-201ENST00000390879 135 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 NCOR1P3-201ENST00000420479 303 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 SNRPEP7-201ENST00000438350 220 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 JTBP1-201ENST00000441314 247 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 MTND2P24-201ENST00000453434 806 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 AC244505.3-201ENST00000454598 187 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 AP001324.2-201ENST00000461163 319 ntBASIC0.31□□□□□ -2.36
UBE2D4Q9Y2X8 RPL21P47-201ENST00000483696 477 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms