Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNU6-331P-201ENST00000384724 107 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 RN7SKP156-201ENST00000410308 342 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC124916.1-201ENST00000444020 547 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 BTF3P15-201ENST00000455606 336 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC133134.1-201ENST00000466800 359 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 RN7SL271P-201ENST00000487601 295 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AK3P2-201ENST00000507976 429 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC010186.2-204ENST00000537668 439 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AL162730.1-201ENST00000605734 292 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC083806.3-201ENST00000614016 455 ntBASIC4.46□□□□□ -1.7
DDX41Q9UJV9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.46□□□□□ -1.7
DDX41Q9UJV9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RNU6-1115P-201ENST00000362490 106 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.31-201ENST00000362574 102 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RNU6-1059P-201ENST00000363752 98 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RNU6-884P-201ENST00000363889 107 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 SNORA70.4-201ENST00000365509 134 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 SNORA41-201ENST00000384675 132 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RNU6-308P-201ENST00000390957 107 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RPL21P17-201ENST00000397467 475 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RPS4XP3-201ENST00000398541 413 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 SNORA3.3-201ENST00000408712 125 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 RNA5SP44-201ENST00000410446 133 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 PMCHL1-202ENST00000423102 261 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AL159987.2-201ENST00000432754 307 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 SNRPEP4-201ENST00000435815 279 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 snoU109.2-201ENST00000459316 135 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 PPIAP15-201ENST00000479662 484 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.661-201ENST00000516003 99 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 SCARNA16.2-201ENST00000516520 172 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AC009314.1-201ENST00000603871 304 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 MIR6076-201ENST00000617521 113 ntBASIC4.45□□□□□ -1.7
DDX41Q9UJV9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.45□□□□□ -1.7
DDX41Q9UJV9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 SNORA71.3-201ENST00000362582 128 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 SNORA73.2-201ENST00000364946 201 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 RNU6-842P-201ENST00000384269 107 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 RNU6-72P-201ENST00000384285 79 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 RNU6-738P-201ENST00000384531 106 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 U8.11-201ENST00000384699 133 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 U8.12-201ENST00000384701 133 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 MIR200C-201ENST00000384980 68 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 U3.37-201ENST00000408528 213 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 NDUFS5P4-201ENST00000412983 318 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AL117339.3-201ENST00000418733 162 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 HIGD1AP2-201ENST00000446367 280 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 U8.18-201ENST00000459285 133 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AC068781.1-201ENST00000488231 618 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AC022493.2-201ENST00000506122 481 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 RNA5SP384-201ENST00000516615 116 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 RN7SKP295-201ENST00000517264 153 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 SYF2P1-201ENST00000550658 413 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 NACAP3-201ENST00000552100 481 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 CPDP1-201ENST00000579660 283 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 MIR3609-201ENST00000582661 80 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AC008739.3-201ENST00000603262 127 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AC024220.1-201ENST00000603675 484 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AL773545.4-201ENST00000637262 310 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 U2.21-201ENST00000637295 81 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 AL513478.4-201ENST00000641636 310 ntBASIC4.44□□□□□ -1.7
DDX41Q9UJV9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX41Q9UJV9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
DDX41Q9UJV9 AC106871.1-201ENST00000568324 3102 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 RNU6-778P-201ENST00000363269 103 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 Y_RNA.252-201ENST00000364556 101 ntBASIC4.43□□□□□ -1.7
DDX41Q9UJV9 RNU6-1317P-201ENST00000364582 104 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms