Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 ARL2BPP2-201ENST00000550907 489 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AL670379.10-201ENST00000604330 253 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AL670379.9-201ENST00000605428 253 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AC069545.1-201ENST00000605671 358 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AC107952.2-201ENST00000606048 486 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AC078880.5-201ENST00000617845 421 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 AL356094.1-201ENST00000624663 1212 ntBASIC1.24□□□□□ -2.21
VPS29Q9UBQ0 RNU6-188P-201ENST00000364207 107 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 RNU6-609P-201ENST00000365459 107 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AL590084.1-201ENST00000407885 387 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC068533.2-201ENST00000411872 306 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 RPL23AP76-201ENST00000441860 458 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 RPS29P23-201ENST00000458635 123 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 snoU13.23-201ENST00000458863 104 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 RPL7P43-201ENST00000478876 753 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC109927.2-201ENST00000506416 303 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 MIR4782-201ENST00000577987 79 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC009977.1-201ENST00000586015 570 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 VN1R87P-201ENST00000596706 487 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 CYP2C61P-201ENST00000604072 290 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AC116312.1-201ENST00000606841 314 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
VPS29Q9UBQ0 RBBP8P1-201ENST00000449447 1844 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 MIR518D-201ENST00000385014 87 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 SNORA17.3-201ENST00000391159 129 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 RNU2-48P-201ENST00000410694 191 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC008267.5-201ENST00000424928 265 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AP000949.1-201ENST00000438328 629 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 BRK1P2-201ENST00000442875 223 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 FDX1P2-201ENST00000450769 375 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 PRELID3BP1-201ENST00000457142 540 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 MEMO1P3-201ENST00000459811 302 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC098862.1-201ENST00000504991 413 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC005832.3-201ENST00000537929 631 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC093249.1-201ENST00000567049 203 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AP001485.1-201ENST00000604799 199 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AL391813.2-201ENST00000609113 322 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC093875.1-201ENST00000623688 504 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC231657.1-201ENST00000624313 397 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 AC099654.9-201ENST00000637055 678 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 ZNF680P1-201ENST00000436625 1469 ntBASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
VPS29Q9UBQ0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 RNU6-661P-201ENST00000362409 107 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 RNU6-744P-201ENST00000365557 107 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 RNU6-898P-201ENST00000365627 104 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 RNU6-1316P-201ENST00000384242 108 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 RN7SKP284-201ENST00000411002 343 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC015712.3-201ENST00000559380 164 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC008269.2-201ENST00000561915 1105 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC136619.2-201ENST00000563361 631 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 PRR13P7-201ENST00000605538 430 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC096772.1-201ENST00000609146 564 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 MIR7843-201ENST00000622274 79 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC091965.5-201ENST00000624785 342 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 AC097655.1-201ENST00000635075 318 ntBASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
VPS29Q9UBQ0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms