Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC073063.1-201ENST00000434352 607 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 SNRPEP4-201ENST00000435815 279 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC027575.1-201ENST00000481064 460 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 RPS27P27-201ENST00000498779 255 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MLLT10P2-201ENST00000506434 249 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC008526.1-201ENST00000509149 338 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 RNU6-273P-201ENST00000516937 96 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 APOOP3-201ENST00000536787 586 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC138761.3-201ENST00000579993 334 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MIR3922-201ENST00000585192 84 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MIR15A-201ENST00000607334 83 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MIR7975-201ENST00000619350 68 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC098657.3-201ENST00000620434 263 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AC006111.3-201ENST00000622137 383 ntBASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
DKK3Q9UBP4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 Y_RNA.187-201ENST00000363918 113 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 RNA5SP42-201ENST00000364278 115 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 RNU6-593P-201ENST00000364716 112 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 SNORA4.3-201ENST00000365564 137 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AL139039.1-201ENST00000401900 692 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 BX842559.1-201ENST00000419615 532 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AL353705.1-201ENST00000433468 480 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 BRK1P2-201ENST00000442875 223 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 RPL21P41-201ENST00000459863 264 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC108860.1-201ENST00000484521 383 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 APOOP4-201ENST00000513530 597 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 SNORA70.18-201ENST00000516696 98 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 SNORA31.26-201ENST00000517250 137 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 PWAR6-201ENST00000552334 4618 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 SNRPGP17-201ENST00000603780 214 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AL080274.1-201ENST00000605565 220 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC124303.1-201ENST00000605703 360 ntBASIC3.57□□□□□ -1.84
DKK3Q9UBP4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.57□□□□□ -1.84
DKK3Q9UBP4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RNU5A-1-201ENST00000362698 116 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RNU6-474P-201ENST00000384243 107 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 Y_RNA.480-201ENST00000384364 102 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RNU6-45P-201ENST00000384471 107 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RNVU1-14-201ENST00000384770 164 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 MIR559-201ENST00000385188 96 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RPL5P18-201ENST00000406671 891 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RN7SKP111-201ENST00000410349 271 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RNU6-954P-201ENST00000411355 107 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 Y_RNA.631-201ENST00000459607 101 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RN7SL594P-201ENST00000470590 287 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 HMGN1P10-201ENST00000474557 553 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RN7SL293P-201ENST00000481765 281 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 RNU6-914P-201ENST00000516749 109 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 MIR3921-201ENST00000577308 85 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 MIR5690-201ENST00000583739 73 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 MIR3171-201ENST00000584270 74 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AL627309.6-201ENST00000606857 840 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
DKK3Q9UBP4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
DKK3Q9UBP4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms