Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC116655.1-201ENST00000508324 901 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 SNORA14.1-201ENST00000516113 141 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 Y_RNA.665-201ENST00000516177 98 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 RNU6-581P-201ENST00000516214 105 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 Y_RNA.687-201ENST00000516558 91 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AP004607.1-201ENST00000524456 203 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL121579.1-201ENST00000555129 305 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AC005261.5-201ENST00000596280 355 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL355877.2-201ENST00000603670 358 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL035413.2-201ENST00000604801 525 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 UCA1.1-201ENST00000620952 75 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LRFN1Q9P244 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRFN1Q9P244 AL079305.1-201ENST00000623159 3008 ntBASIC3.25□□□□□ -1.89
LRFN1Q9P244 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN1Q9P244 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 RNU6-942P-201ENST00000363002 107 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 RNU5E-4P-201ENST00000364931 120 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 RNU6-1280P-201ENST00000365211 107 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 MIR1289-1-201ENST00000408836 144 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 RNU4-26P-201ENST00000410270 107 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 HIGD1AP2-201ENST00000446367 280 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 RN7SL601P-201ENST00000471221 293 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 MTCYBP18-201ENST00000501056 747 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 RNU6-579P-201ENST00000516879 102 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 RN7SKP57-201ENST00000517248 293 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 AC069113.1-201ENST00000517763 267 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 KLKP1-201ENST00000595979 403 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 BNIP3P25-201ENST00000596023 559 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 AC008739.2-201ENST00000597006 317 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 ATP1B3P1-201ENST00000605365 821 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 SNORA50A-202ENST00000629536 136 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LRFN1Q9P244 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN1Q9P244 CASC19-280ENST00000642102 1351 ntBASIC3.24□□□□□ -1.89
LRFN1Q9P244 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRFN1Q9P244 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRFN1Q9P244 AC004944.1-201ENST00000517807 3059 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 AL049781.1-201ENST00000623195 3585 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 MT-TL1-201ENST00000386347 75 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 PTGES3P4-201ENST00000426243 356 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 TRIAP1P1-201ENST00000427062 225 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 snoU109.2-201ENST00000459316 135 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 AC087884.1-201ENST00000469738 328 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 AC092794.2-201ENST00000620933 563 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 RMST_7.1-201ENST00000621935 268 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRFN1Q9P244 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
LRFN1Q9P244 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LRFN1Q9P244 SNORA72.1-201ENST00000363485 129 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 RNU6-332P-201ENST00000391193 108 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 RNU6-876P-201ENST00000391295 104 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AL122016.1-201ENST00000403365 367 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC009161.1-201ENST00000417306 376 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 OSTCP8-201ENST00000445117 448 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AL671855.1-201ENST00000446875 1203 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 RPS29P2-201ENST00000479278 136 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 RN7SKP83-201ENST00000516512 178 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 RNU6-1069P-201ENST00000516612 133 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 ACA59.2-201ENST00000517061 156 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AF235103.2-201ENST00000525753 346 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC023050.3-201ENST00000541142 333 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.22□□□□□ -1.89
LRFN1Q9P244 APOOP1-201ENST00000604695 592 ntBASIC3.22□□□□□ -1.89
LRFN1Q9P244 AC006504.8-201ENST00000621046 635 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms