Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC092047.1-201ENST00000424997 240 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 MTCYBP9-201ENST00000431021 303 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 AL159987.2-201ENST00000432754 307 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 RPS29P7-201ENST00000439662 171 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 AL356535.1-201ENST00000440335 398 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 U8.21-201ENST00000459536 136 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 AC069499.1-201ENST00000489433 509 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 RPL30P5-201ENST00000494923 336 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 RNA5SP468-201ENST00000516782 93 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 MIR3690-201ENST00000580266 75 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 SNORD58B-201ENST00000607313 66 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 AC010205.1-201ENST00000616668 449 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 MAPK10-372ENST00000641954 3413 ntBASIC3.72□□□□□ -1.81
KCMF1Q9P0J7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
KCMF1Q9P0J7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 MIR423-201ENST00000362201 94 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 RNY1P16-201ENST00000363063 111 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 RNU6-450P-201ENST00000364654 107 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 DEFB109C-201ENST00000382575 264 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 DEFB109B-201ENST00000382656 264 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 RNU6-213P-201ENST00000384051 104 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.533-201ENST00000384596 114 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 SNORA11-201ENST00000408789 128 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 MIR1183-201ENST00000408856 89 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 NUP35P1-201ENST00000422734 947 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AL353752.1-201ENST00000454946 260 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 MTCO2P24-201ENST00000515611 426 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AC007991.1-201ENST00000522680 631 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 CASP1P1-201ENST00000526345 212 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 HSBP1P1-201ENST00000555205 166 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AC113195.1-201ENST00000579952 141 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AL158827.2-201ENST00000602494 330 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AL606534.2-204ENST00000635008 178 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 AL691447.3-201ENST00000635020 330 ntBASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KCMF1Q9P0J7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 FTLP6-201ENST00000355274 422 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RNU6-428P-201ENST00000362942 107 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.149-201ENST00000363558 117 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RNU5E-7P-201ENST00000365290 117 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RNU6-26P-201ENST00000383985 107 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.577-201ENST00000384794 101 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AL591034.2-201ENST00000402839 359 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RNU6-1156P-201ENST00000410365 100 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 DPH3P2-201ENST00000422618 250 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RN7SL132P-201ENST00000478131 296 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RNA5SP309-201ENST00000516670 106 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AC109479.2-201ENST00000517842 174 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 ZNF192P1-203ENST00000565888 810 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 MIR4782-201ENST00000577987 79 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AC006023.2-201ENST00000609916 167 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 HMGB1P24-202ENST00000615653 685 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
KCMF1Q9P0J7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.47-201ENST00000362697 108 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.153-201ENST00000363615 91 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 RNY3P11-201ENST00000364153 102 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 MIR134-201ENST00000385258 73 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 RNU6-101P-201ENST00000410323 104 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 MTND3P9-201ENST00000429526 346 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AC026726.1-201ENST00000512859 601 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 RNU6-377P-201ENST00000515965 102 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 RNU2-58P-201ENST00000516403 183 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.721-201ENST00000517207 102 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AP005902.1-201ENST00000521358 186 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 RN7SL703P-201ENST00000578485 302 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 MIR3149-201ENST00000584629 83 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AL591424.2-201ENST00000617023 128 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms