Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-989P-201ENST00000362756 107 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNY1-201ENST00000364228 113 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNA5SP240-201ENST00000365355 128 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNU6-493P-201ENST00000391321 108 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 SAR1AP2-201ENST00000392696 594 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNU6-130P-201ENST00000411112 103 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNU6-516P-201ENST00000411381 104 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNA5SP111-201ENST00000411386 101 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 RNU2-71P-201ENST00000411395 189 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 FABP5P13-201ENST00000452144 328 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC008155.2-201ENST00000464337 397 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG3Q9NT62 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 AC010620.2-201ENST00000600135 313 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 MIR3651-201ENST00000630427 90 ntBASIC4.85□□□□□ -1.63
ATG3Q9NT62 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG3Q9NT62 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG3Q9NT62 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG3Q9NT62 AC027290.2-201ENST00000623210 18662 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG3Q9NT62 AC018555.1-201ENST00000567548 1980 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG3Q9NT62 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
ATG3Q9NT62 RNU6-545P-201ENST00000362681 104 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 RNU6-1303P-201ENST00000364841 107 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 U3.29-201ENST00000391296 212 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 SNORD58.1-201ENST00000391313 66 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 MIR548H3-201ENST00000408771 118 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 RNU6-174P-201ENST00000410406 106 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 RNU6-1203P-201ENST00000410703 110 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 RNU2-25P-201ENST00000411041 191 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 CYCSP4-201ENST00000429682 331 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 AC073063.1-201ENST00000434352 607 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG3Q9NT62 snoU13.3-201ENST00000459441 104 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 RPL31P61-201ENST00000496160 376 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG3Q9NT62 AC109329.1-201ENST00000518744 317 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 CBX3P8-201ENST00000532412 525 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG3Q9NT62 AC002044.1-201ENST00000606707 158 ntBASIC4.84□□□□□ -1.63
ATG3Q9NT62 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.84□□□□□ -1.63
ATG3Q9NT62 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG3Q9NT62 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
ATG3Q9NT62 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
ATG3Q9NT62 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.84□□□□□ -1.64
ATG3Q9NT62 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 SNORD9-201ENST00000362566 104 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 Y_RNA.65-201ENST00000362846 100 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 Y_RNA.84-201ENST00000363011 104 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 RNU6-1284P-201ENST00000363701 100 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 Y_RNA.237-201ENST00000364439 102 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 RNU6-701P-201ENST00000384059 107 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 MIR215-201ENST00000384858 110 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 AL158156.1-201ENST00000422509 473 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 UBE2D3P2-201ENST00000424409 445 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 RN7SL432P-201ENST00000484057 298 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 RNU6-1212P-201ENST00000517023 104 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 VN1R91P-201ENST00000594377 169 ntBASIC4.83□□□□□ -1.64
ATG3Q9NT62 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.83□□□□□ -1.64
ATG3Q9NT62 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ATG3Q9NT62 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
ATG3Q9NT62 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG3Q9NT62 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
ATG3Q9NT62 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ATG3Q9NT62 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms