Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 Y_RNA.33-201ENST00000362591 102 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RNA5SP387-201ENST00000364226 106 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 SNORD114-6-201ENST00000364393 72 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-72P-201ENST00000384285 79 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-296P-201ENST00000384608 107 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC119751.3-201ENST00000399720 670 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 MIR1304-201ENST00000408243 91 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RN7SKP202-201ENST00000410439 330 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 USP9YP33-201ENST00000412220 421 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC245028.1-201ENST00000423259 256 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC005326.1-201ENST00000429197 123 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 LARP1BP3-201ENST00000437229 869 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC105272.1-201ENST00000438604 198 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 HMGB3P12-201ENST00000438745 556 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AL591503.2-201ENST00000442314 1005 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC096638.1-201ENST00000444678 216 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 snoU13.9-201ENST00000458927 103 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 SNORD109B-201ENST00000458961 67 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 SNORD109A-201ENST00000459128 67 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-953P-201ENST00000459154 107 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC079395.1-201ENST00000510981 262 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC087441.2-201ENST00000529141 262 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 BCRP9-201ENST00000605312 388 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC022893.3-201ENST00000607665 437 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC097468.3-201ENST00000607956 456 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC092574.1-201ENST00000609771 420 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AL159153.1-201ENST00000619688 317 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC068831.8-201ENST00000620171 435 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 MIR6873-201ENST00000622788 63 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC018445.2-201ENST00000622987 260 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 AC091948.2-201ENST00000636510 279 ntBASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-112P-201ENST00000363599 104 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 SNORD1A-201ENST00000364968 72 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 RNVU1-14-201ENST00000384770 164 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 MIR29B2-201ENST00000385055 81 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 MIR320C1-201ENST00000408566 88 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 RPL37P10-201ENST00000412884 288 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 NCOR1P3-201ENST00000420479 303 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL365338.1-201ENST00000422282 858 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL358453.1-201ENST00000422522 250 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL645568.3-201ENST00000433683 316 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 TRIM60P9Y-201ENST00000438459 816 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL117351.1-201ENST00000438864 766 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 TRIM60P11Y-201ENST00000445313 801 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL583843.1-201ENST00000456070 346 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 HMGB1P30-201ENST00000492455 606 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC108078.1-201ENST00000508073 725 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-991P-201ENST00000516168 107 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC002400.1-201ENST00000569310 726 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL596327.1-201ENST00000603629 213 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC112220.2-201ENST00000605513 533 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL355816.2-201ENST00000610049 647 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 SDR42E1P1-201ENST00000611327 477 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC130324.3-201ENST00000614165 542 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC006338.2-201ENST00000616864 791 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AL356266.1-201ENST00000623311 483 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 MIR6830-201ENST00000636015 70 ntBASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC0.72□□□□□ -2.29
CDC42SE1Q9NRR8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 MTND5P9-201ENST00000503854 1755 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-462P-201ENST00000362659 105 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 SNORA63.3-201ENST00000362682 132 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-23P-201ENST00000363283 107 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 Y_RNA.192-201ENST00000363977 102 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-743P-201ENST00000364151 106 ntBASIC0.71□□□□□ -2.3
CDC42SE1Q9NRR8 SNORA38.1-201ENST00000364172 131 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms