Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AC074250.1-201ENST00000511117 192 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-182P-201ENST00000516970 105 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 DEFB108E-201ENST00000524692 240 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 RN7SL600P-201ENST00000581811 299 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AC012603.1-201ENST00000606424 528 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AC008785.1-201ENST00000624475 456 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 U2.22-201ENST00000636441 106 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 AL049555.1-201ENST00000562834 1933 ntBASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
SEC61A2Q9H9S3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AL391987.6-201ENST00000305671 199 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-428P-201ENST00000362942 107 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 RNA5SP322-201ENST00000363617 119 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 SNORD35B-201ENST00000363660 87 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 SNORD14B-201ENST00000364533 90 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AL138878.1-201ENST00000405131 347 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 MIR548H3-201ENST00000408771 118 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 RNU2-14P-201ENST00000411053 191 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC004975.1-201ENST00000428733 208 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 RPL29P14-201ENST00000495837 428 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC010469.2-201ENST00000496412 480 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-612P-201ENST00000516909 102 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 IGKV2-23-201ENST00000518729 323 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC025755.1-201ENST00000521306 278 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC022080.3-201ENST00000544433 482 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC136624.4-201ENST00000573044 370 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC130289.1-201ENST00000577321 73 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC008121.1-201ENST00000603244 268 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AL591034.3-201ENST00000605511 685 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AL161629.2-201ENST00000615347 275 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC090617.7-201ENST00000623952 126 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 BMS1P21-201ENST00000634565 365 ntBASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SEC61A2Q9H9S3 AC026951.1-201ENST00000559530 2459 ntBASIC3.65□□□□□ -1.82
SEC61A2Q9H9S3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
SEC61A2Q9H9S3 snoU2_19.2-201ENST00000363024 80 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.150-201ENST00000363562 102 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 RNA5SP479-201ENST00000364858 117 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 RNU1-89P-201ENST00000384592 164 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 MIR3074-201ENST00000384885 81 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AL117339.3-201ENST00000418733 162 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 SDAD1P3-201ENST00000427380 333 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 TOMM20P4-201ENST00000427861 435 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC007919.1-201ENST00000429380 217 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC004383.1-201ENST00000438135 289 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC034236.1-201ENST00000469891 373 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC025554.1-201ENST00000505641 188 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 SNORA31.20-201ENST00000517111 133 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 SNORA81.3-201ENST00000517283 198 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AL590705.4-201ENST00000532209 134 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC008962.1-201ENST00000605729 304 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC009318.2-201ENST00000610917 651 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 MIR8059-201ENST00000620427 81 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AL450472.1-202ENST00000637286 180 ntBASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.65□□□□□ -1.83
SEC61A2Q9H9S3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms