Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC087752.4-201ENST00000605911 462 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AP001506.1-201ENST00000615444 211 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
NXF3Q9H4D5 YWHAEP7-203ENST00000622054 312 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AP006437.1-201ENST00000641440 3685 ntBASIC2.21□□□□□ -2.06
NXF3Q9H4D5 AC010329.5-201ENST00000623497 2174 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL356292.1-201ENST00000283110 373 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RNA5SP432-201ENST00000362480 116 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RPL23AP32-201ENST00000395315 459 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RNU6-248P-201ENST00000410720 107 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RNU2-8P-201ENST00000410727 190 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 ZNF90P2-204ENST00000419323 1075 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RPS15AP12-201ENST00000419498 388 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 SEPT2P1-201ENST00000419651 180 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC137499.1-201ENST00000427602 88 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL591806.2-201ENST00000433122 173 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 USP9YP15-201ENST00000442391 422 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 SNORD97-201ENST00000459187 142 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 MTND1P3-201ENST00000484956 952 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC010587.1-201ENST00000505809 469 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 SNORA31.3-201ENST00000516029 96 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RNA5SP337-201ENST00000517007 109 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 RNU2-46P-201ENST00000517038 113 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC011979.2-201ENST00000527568 352 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 NACAP3-201ENST00000552100 481 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC008250.2-201ENST00000615261 205 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AC006338.1-201ENST00000618453 749 ntBASIC2.2□□□□□ -2.06
NXF3Q9H4D5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.2□□□□□ -2.06
NXF3Q9H4D5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 OR56A5-201ENST00000340110 738 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 RNU5E-1-201ENST00000362477 120 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 U8.3-201ENST00000363321 132 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 RNU6-297P-201ENST00000384636 107 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 NDUFS5P4-201ENST00000412983 318 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC027124.2-201ENST00000428249 105 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC009961.2-201ENST00000435771 251 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 RPS15AP5-201ENST00000436276 388 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 USP9YP8-201ENST00000441913 500 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AL022238.1-201ENST00000442557 355 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 IFNA11P-201ENST00000446352 526 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 RAP1BP2-201ENST00000478270 544 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 GZMAP1-201ENST00000503054 631 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 RNU2-10P-201ENST00000516375 211 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 BTF3P12-201ENST00000519620 469 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 ARL2BPP2-201ENST00000550907 489 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AL359212.1-201ENST00000556608 614 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 MIR3682-201ENST00000581338 84 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 HMGN2P15-201ENST00000585707 270 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 NBR2-204ENST00000587322 63 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 FRG1KP-201ENST00000623592 341 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.19□□□□□ -2.06
NXF3Q9H4D5 TEX21P-201ENST00000447107 1476 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
NXF3Q9H4D5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
NXF3Q9H4D5 FARSBP1-201ENST00000435808 1778 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 AL390237.1-201ENST00000404226 1415 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 RNU5E-6P-201ENST00000365574 115 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 RNU6-1083P-201ENST00000384022 107 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 RNU6-750P-201ENST00000390946 107 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 NDUFS5P1-201ENST00000405668 289 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NXF3Q9H4D5 RAC1P6-201ENST00000423911 575 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.18□□□□□ -2.06
NXF3Q9H4D5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.18□□□□□ -2.06
NXF3Q9H4D5 AC119618.1-201ENST00000434191 222 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 MTCO2P16-201ENST00000436962 677 ntBASIC2.18□□□□□ -2.06
NXF3Q9H4D5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.18□□□□□ -2.06
NXF3Q9H4D5 USP9YP29-201ENST00000445112 563 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms