Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 OR6C66P-201ENST00000414917 930 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 MTATP6P18-201ENST00000417994 673 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC073464.1-201ENST00000429823 534 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 MYL8P-204ENST00000431574 518 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AL451074.3-201ENST00000437709 472 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC104058.1-201ENST00000448028 297 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.55□□□□□ -2
UBQLN3Q9H347 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.55□□□□□ -2
UBQLN3Q9H347 MTND3P5-201ENST00000512798 333 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC112206.3-201ENST00000514578 389 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 RNU6-405P-201ENST00000516637 110 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC093536.2-201ENST00000565257 1406 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC138761.3-201ENST00000579993 334 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AL356280.1-201ENST00000603614 379 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AL138889.2-201ENST00000603883 242 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 ATP1B3P1-201ENST00000605365 821 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC007684.1-201ENST00000609671 477 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 AC136475.10-201ENST00000620253 385 ntBASIC2.55□□□□□ -2
UBQLN3Q9H347 HSPA8P4-201ENST00000511877 1920 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 AC135776.4-201ENST00000624300 1904 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.54□□□□□ -2
UBQLN3Q9H347 SNORD3E-201ENST00000362899 217 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 RNU4-40P-201ENST00000364351 143 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 OR5H15-201ENST00000383696 930 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 Y_RNA.623-201ENST00000411128 95 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.54□□□□□ -2
UBQLN3Q9H347 AL031779.1-201ENST00000415663 330 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 RPL21P90-201ENST00000415692 466 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 USP9YP14-201ENST00000430663 563 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 MTND1P18-201ENST00000448191 573 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 AIG1P1-201ENST00000503376 148 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
UBQLN3Q9H347 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.54□□□□□ -2
UBQLN3Q9H347 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.54□□□□□ -2
UBQLN3Q9H347 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.54□□□□□ -2
UBQLN3Q9H347 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.54□□□□□ -2
UBQLN3Q9H347 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.54□□□□□ -2
UBQLN3Q9H347 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.54□□□□□ -2
UBQLN3Q9H347 AC025678.1-201ENST00000567861 338 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.54□□□□□ -2
UBQLN3Q9H347 AC091152.3-201ENST00000604227 325 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 Z99129.1-201ENST00000612510 255 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 MIR6134-201ENST00000617606 109 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.54□□□□□ -2
UBQLN3Q9H347 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
UBQLN3Q9H347 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.54□□□□□ -2
UBQLN3Q9H347 ZNF680P1-201ENST00000436625 1469 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC010329.5-201ENST00000623497 2174 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 MIR412-201ENST00000362142 91 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 MIR26A1-201ENST00000362205 77 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 RNU6-1120P-201ENST00000362988 108 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 SNORA5B-201ENST00000363786 132 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 Y_RNA.436-201ENST00000384097 102 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 RNU6-19P-201ENST00000384718 107 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 MIR147B-201ENST00000390185 80 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 RNU6-550P-201ENST00000391057 101 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.53□□□□□ -2
UBQLN3Q9H347 MTCYBP5-201ENST00000423752 1135 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC000111.3-201ENST00000433478 193 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC002486.1-201ENST00000435098 391 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 RPL23AP20-201ENST00000447965 421 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 AC116655.1-201ENST00000508324 901 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 MTCO3P7-201ENST00000510008 774 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 SNORD19.2-201ENST00000516978 73 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 FAM92A1P1-201ENST00000528023 890 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 AC009063.1-201ENST00000563342 702 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC092325.1-201ENST00000566449 554 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.53□□□□□ -2
UBQLN3Q9H347 MIR5692A1-201ENST00000580523 69 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.53□□□□□ -2
UBQLN3Q9H347 CR381653.2-201ENST00000624041 768 ntBASIC2.53□□□□□ -2
UBQLN3Q9H347 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
UBQLN3Q9H347 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.53□□□□□ -2
UBQLN3Q9H347 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
UBQLN3Q9H347 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
UBQLN3Q9H347 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 Y_RNA.159-201ENST00000363674 87 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AL138827.1-201ENST00000402666 306 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 EEF1A1P40-201ENST00000412883 573 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AL592148.1-201ENST00000413568 445 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 PTGES3P4-201ENST00000426243 356 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.52□□□□□ -2.01
UBQLN3Q9H347 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AL596276.1-201ENST00000434465 418 ntBASIC2.52□□□□□ -2.01
UBQLN3Q9H347 AC104389.3-201ENST00000445629 235 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms