Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RANP3-201ENST00000530970 276 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 PSMA3P-201ENST00000555485 635 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 AL355375.2-201ENST00000574825 175 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 DUSP12P1-201ENST00000612874 516 ntBASIC3.24□□□□□ -1.89
CDT1Q9H211 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.24□□□□□ -1.89
CDT1Q9H211 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDT1Q9H211 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDT1Q9H211 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.24□□□□□ -1.89
CDT1Q9H211 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDT1Q9H211 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDT1Q9H211 AL035425.3-201ENST00000564206 4996 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 RNU6-1167P-201ENST00000363227 94 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 Y_RNA.231-201ENST00000364358 102 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 Y_RNA.373-201ENST00000365600 103 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDT1Q9H211 RNU6-116P-201ENST00000384042 109 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 Y_RNA.474-201ENST00000384341 102 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 RNU1-101P-201ENST00000391171 127 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.23□□□□□ -1.89
CDT1Q9H211 CISD1P1-201ENST00000393907 327 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 FAT1P1-201ENST00000406588 507 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 RNU2-29P-201ENST00000410423 189 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.23□□□□□ -1.89
CDT1Q9H211 OR6C66P-201ENST00000414917 930 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.23□□□□□ -1.89
CDT1Q9H211 AC092573.2-201ENST00000434546 243 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.23□□□□□ -1.89
CDT1Q9H211 AL590639.1-201ENST00000456484 337 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AP001486.1-201ENST00000463339 476 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 RPS20P22-201ENST00000473700 357 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 MTND4LP22-201ENST00000508209 276 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.23□□□□□ -1.89
CDT1Q9H211 RNU4-29P-201ENST00000515943 174 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.23□□□□□ -1.89
CDT1Q9H211 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDT1Q9H211 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AC098826.3-201ENST00000603823 466 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AC008962.1-201ENST00000605729 304 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 AL359547.2-201ENST00000615810 418 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
CDT1Q9H211 SNORA50A-202ENST00000629536 136 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 MTND1P37-201ENST00000636562 264 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 TPTEP1-208ENST00000636884 213 ntBASIC3.23□□□□□ -1.89
CDT1Q9H211 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.23□□□□□ -1.89
CDT1Q9H211 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDT1Q9H211 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CDT1Q9H211 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
CDT1Q9H211 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDT1Q9H211 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CDT1Q9H211 Y_RNA.132-201ENST00000363421 102 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 Y_RNA.378-201ENST00000365652 113 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 MIR325-201ENST00000385260 98 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 SNORD37.1-201ENST00000390968 65 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RNU6-550P-201ENST00000391057 101 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RNU6-1197P-201ENST00000391183 107 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RN7SKP32-201ENST00000410167 303 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RNU6-193P-201ENST00000410977 107 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RNA5SP111-201ENST00000411386 101 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 MTND3P8-201ENST00000412909 339 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 EEF1A1P41-201ENST00000414667 207 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AL590383.1-201ENST00000428602 75 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC022018.1-201ENST00000430685 241 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 ERLEC1P1-201ENST00000433806 578 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 NDUFB4P6-201ENST00000436819 366 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.22□□□□□ -1.89
CDT1Q9H211 PIGFP3-201ENST00000441918 722 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RPL21P8-201ENST00000465083 535 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 KC877373.1-201ENST00000479066 408 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC083904.1-201ENST00000487828 231 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.22□□□□□ -1.89
CDT1Q9H211 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.22□□□□□ -1.89
CDT1Q9H211 CASP1P1-201ENST00000526345 212 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC022690.1-201ENST00000526681 550 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.22□□□□□ -1.89
CDT1Q9H211 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.22□□□□□ -1.89
CDT1Q9H211 AC243960.4-201ENST00000600532 288 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AL161798.1-201ENST00000604630 131 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AL033523.1-201ENST00000605153 153 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AL133255.1-201ENST00000606374 441 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 MIR15A-201ENST00000607334 83 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC002076.2-201ENST00000617362 122 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 uc_338.11-201ENST00000619132 160 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 RMST_7.1-201ENST00000621935 268 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC006111.3-201ENST00000622137 383 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC006386.2-201ENST00000624491 75 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 AC012005.1-201ENST00000624575 75 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CDT1Q9H211 TPTE2P4-201ENST00000258589 1605 ntBASIC3.22□□□□□ -1.89
CDT1Q9H211 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDT1Q9H211 AC007785.2-201ENST00000598627 1916 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms