Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 SNORA14A-201ENST00000364773 135 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 RNU4-20P-201ENST00000365601 151 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 SNORA16.2-201ENST00000390991 127 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 RAP1BP3-201ENST00000407180 549 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 RN7SKP284-201ENST00000411002 343 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 RNU6-607P-201ENST00000411283 108 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 POLHP1-201ENST00000411806 470 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 EEF1A1P41-201ENST00000414667 207 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AL135938.1-201ENST00000443141 297 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 HMGN2P26-201ENST00000463169 339 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC139453.3-201ENST00000493276 369 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 MTCO3P9-201ENST00000506989 781 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC118273.2-201ENST00000532092 465 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 OR11H5P-201ENST00000554039 926 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC012119.1-201ENST00000603184 222 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 BNIP3P10-201ENST00000605360 577 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC099778.2-201ENST00000610904 211 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 AC121333.1-201ENST00000567488 2709 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 ZNF826P-207ENST00000622273 1910 ntBASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RTFDC1Q9BY42 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC110491.1-201ENST00000562191 2010 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 Y_RNA.72-201ENST00000362894 103 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 RNU1-105P-201ENST00000363470 161 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 RNA5SP252-201ENST00000391131 119 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 BX682237.1-201ENST00000415016 335 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AL714022.1-201ENST00000439897 151 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC098831.1-201ENST00000440661 216 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC006026.2-201ENST00000457376 180 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC007547.1-201ENST00000462177 490 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 TGIF1P1-201ENST00000558095 802 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 ELOCP29-201ENST00000588193 334 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC103705.1-201ENST00000619013 241 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 AC099654.14-201ENST00000638599 341 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RTFDC1Q9BY42 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 RNA5SP139-201ENST00000364340 117 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 RNU6-1283P-201ENST00000365314 105 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 SNORA48.8-201ENST00000391324 134 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AL356057.2-201ENST00000403318 432 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 RPLP0P7-201ENST00000416050 667 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC245291.1-201ENST00000419501 328 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 HMGB1P31-201ENST00000437242 427 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 HIGD1AP11-201ENST00000438361 280 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 MRPS31P2-201ENST00000451581 518 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AL583843.1-201ENST00000456070 346 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 TRBVA-201ENST00000498804 316 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC098799.2-201ENST00000509466 868 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC093331.1-201ENST00000521474 169 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 LINC00933-203ENST00000559812 219 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 MIR5583-1-201ENST00000580941 59 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC092747.3-201ENST00000603769 301 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC092807.2-201ENST00000609367 243 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AL031601.2-202ENST00000622650 282 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 AC009033.1-201ENST00000624279 431 ntBASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RTFDC1Q9BY42 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC103988.1-201ENST00000566382 2177 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms