Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 C8orf59P1-201ENST00000429930 303 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AL358934.1-201ENST00000432346 324 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC005094.1-201ENST00000440420 368 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 HIGD1AP2-201ENST00000446367 280 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 MTND1P9-201ENST00000453775 944 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 SNRPFP4-201ENST00000456366 242 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 EIF4EP3-201ENST00000498782 656 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC138853.1-201ENST00000503549 823 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC108210.2-201ENST00000503681 201 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC022483.1-201ENST00000514020 567 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 RNU6-430P-201ENST00000517078 107 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 HSPE1P18-201ENST00000517602 280 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 COX6CP5-201ENST00000527162 228 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AP003392.2-201ENST00000527269 208 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 DEFB108A-201ENST00000530110 222 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 ARL2BPP2-201ENST00000550907 489 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 MIR3616-201ENST00000584070 92 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC073648.5-201ENST00000603502 305 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC121334.2-201ENST00000605387 271 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC012443.1-201ENST00000605605 231 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AL021997.1-201ENST00000605757 193 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC012557.2-201ENST00000605919 418 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC093838.1-201ENST00000613014 469 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 uc_338.12-201ENST00000616344 181 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC006338.1-201ENST00000618453 749 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 MTCO1P9-201ENST00000505577 1534 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 FARSBP1-201ENST00000435808 1778 ntBASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RSPO3Q9BXY4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RNU6-511P-201ENST00000363496 107 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RN7SKP226-201ENST00000364912 300 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 SNORA23-201ENST00000365128 182 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 SNORA51.11-201ENST00000384442 131 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 SNORA48.3-201ENST00000391081 134 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RPL23AP32-201ENST00000395315 459 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 Y_RNA.599-201ENST00000410489 109 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 UBE2FP1-201ENST00000416536 447 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 MTND3P17-201ENST00000416968 344 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 CCDC58P2-201ENST00000417131 366 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RPS15AP12-201ENST00000419498 388 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RPL7L1P10-201ENST00000427790 463 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RPL31P35-201ENST00000431058 377 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 DNAJC19P4-201ENST00000440115 345 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC104058.1-201ENST00000448028 297 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 MTCYBP1-201ENST00000454315 1119 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC087588.1-201ENST00000462203 316 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC010631.1-201ENST00000474150 156 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RPL21P99-201ENST00000480369 423 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RPL23AP41-201ENST00000484754 458 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC091133.4-201ENST00000511142 308 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 RNU6-720P-201ENST00000516363 108 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 SNORA70.16-201ENST00000516390 95 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC022616.3-201ENST00000523940 148 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 HMGB1P14-201ENST00000557424 591 ntBASIC1.94□□□□□ -2.1
RSPO3Q9BXY4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms