Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 Y_RNA.409-201ENST00000383990 98 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-1035P-201ENST00000384477 107 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.576-201ENST00000384781 102 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 MIR301A-201ENST00000385261 86 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 UBA52P6-201ENST00000399822 382 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AL356967.1-201ENST00000406305 431 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 RNU2-29P-201ENST00000410423 189 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 RPL35AP12-201ENST00000425362 338 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AL451062.2-201ENST00000427515 271 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 GPM6BP2-201ENST00000432046 144 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AL596276.1-201ENST00000434465 418 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 UBE2V1P8-201ENST00000437166 265 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 GPM6BP1-201ENST00000446387 144 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 FDX1P2-201ENST00000450769 375 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC003071.1-201ENST00000451219 789 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC006445.2-201ENST00000510061 472 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-123P-201ENST00000516163 102 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 CKS1BP7-201ENST00000522230 235 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AL512360.1-201ENST00000555346 234 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AP001596.2-201ENST00000608410 312 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 AC093788.1-201ENST00000609356 927 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 U6atac.1-201ENST00000616025 117 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 ATP5A1P2-202ENST00000616464 443 ntBASIC2.48□□□□□ -2.01
CCDC28BQ9BUN5 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-512P-201ENST00000364438 103 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-996P-201ENST00000365438 107 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.402-201ENST00000383972 102 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-1029P-201ENST00000384109 107 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-140P-201ENST00000384566 108 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 Y_RNA.554-201ENST00000384672 102 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 MIR9-1-201ENST00000385198 89 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL356057.3-201ENST00000402607 340 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL162578.1-201ENST00000406202 378 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC092809.3-201ENST00000415453 231 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC087499.2-201ENST00000432861 149 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL606489.2-201ENST00000433886 234 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RPL7P54-201ENST00000438336 674 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC016691.1-201ENST00000441321 413 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 MTND1P18-201ENST00000448191 573 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL672167.3-201ENST00000465951 960 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC006512.1-201ENST00000468816 291 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RPS15AP34-201ENST00000487776 387 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC109927.2-201ENST00000506416 303 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC104806.1-201ENST00000508720 308 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RNU6-914P-201ENST00000516749 109 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 RN7SKP219-201ENST00000516825 296 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC027807.1-201ENST00000559921 996 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 CYCSP39-201ENST00000565821 309 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 MIR4703-201ENST00000577728 79 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 HSPE1P7-201ENST00000604681 321 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC008945.2-201ENST00000606056 604 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC090517.2-201ENST00000614966 680 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 MIR1321-201ENST00000637766 79 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 AC006020.1-201ENST00000420179 1854 ntBASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
CCDC28BQ9BUN5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
CCDC28BQ9BUN5 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-1287P-201ENST00000362914 107 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 RNY4P14-201ENST00000363656 96 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 Y_RNA.255-201ENST00000364581 97 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 SET-203ENST00000372688 801 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 RNU6-1060P-201ENST00000384664 107 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC068050.1-201ENST00000394891 380 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 RNU4-46P-201ENST00000410818 138 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 OR6C66P-201ENST00000414917 930 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 SNRPEP9-201ENST00000436794 238 ntBASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC28BQ9BUN5 RPS29P15-201ENST00000458329 171 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms