Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RPL36AP53-201ENST00000432891 316 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 USP9YP35-201ENST00000435696 412 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 MTCO2P20-201ENST00000437339 673 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RPS29P28-201ENST00000446439 141 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 PRELID3BP1-201ENST00000457142 540 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 snoU13.23-201ENST00000458863 104 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RNU1-123P-201ENST00000458950 160 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC005908.1-201ENST00000468701 347 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC132942.1-201ENST00000486753 483 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 PTP4A1P4-201ENST00000512479 322 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RNA5SP61-201ENST00000516453 100 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AP003034.1-201ENST00000534621 422 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 HIGD1AP17-201ENST00000554576 276 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 RPL21P5-201ENST00000554662 472 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC136619.2-201ENST00000563361 631 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC090330.1-201ENST00000588646 764 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 WISP1-OT1-201ENST00000602893 642 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC025811.1-201ENST00000604312 472 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC096772.1-201ENST00000609146 564 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.76□□□□□ -2.29
LIMD2Q9BT23 AC107982.1-201ENST00000507171 1300 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 RNU4-91P-201ENST00000364778 135 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 RNU6-1280P-201ENST00000365211 107 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 RNU6-114P-201ENST00000384704 105 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 SNORD65.1-201ENST00000390889 71 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 RNU6-952P-201ENST00000391164 108 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 BTF3L4P3-201ENST00000418879 476 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 BX119904.4-201ENST00000424402 301 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 DPRXP1-201ENST00000426312 460 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 DEFB130D-201ENST00000426866 237 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AL591806.2-201ENST00000433122 173 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 SEPT7P5-201ENST00000434048 306 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 RN7SKP210-201ENST00000459176 261 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 MEMO1P3-201ENST00000459811 302 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 SNORA31.3-201ENST00000516029 96 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 SNRPGP1-201ENST00000553864 222 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 RPL30P11-203ENST00000598995 310 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 BNIP3P27-201ENST00000599991 412 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 CLIC4P2-201ENST00000601934 717 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 OR4H6P-202ENST00000603819 340 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC107952.2-201ENST00000606048 486 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AL022345.1-201ENST00000607292 135 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 MIR6078-201ENST00000611069 100 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC241585.2-209ENST00000638217 143 ntBASIC0.75□□□□□ -2.29
LIMD2Q9BT23 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.75□□□□□ -2.29
LIMD2Q9BT23 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 RNU6-1207P-201ENST00000384343 107 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 MIR597-201ENST00000384968 97 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 MIR1285-1-201ENST00000408593 84 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 RPL23AP36-201ENST00000413895 458 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 CYCSP49-201ENST00000420810 319 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC008267.5-201ENST00000424928 265 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 DYNLT3P2-201ENST00000442517 295 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 MTATP6P30-201ENST00000443540 664 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 snoU13.9-201ENST00000458927 103 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC121161.1-201ENST00000510606 652 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AP000763.2-201ENST00000540641 163 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 RAB11AP2-201ENST00000545905 639 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 RPS3AP4-201ENST00000555161 764 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 MIR4421-201ENST00000578133 69 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 SNORA77B-201ENST00000578179 125 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC126365.2-201ENST00000580630 379 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AL645939.4-201ENST00000604495 135 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AL050343.2-201ENST00000607338 280 ntBASIC0.74□□□□□ -2.29
LIMD2Q9BT23 AC097468.3-201ENST00000607956 456 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms