Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.47□□□□□ -2.01
VGLL1Q99990 FRG2DP-202ENST00000566967 323 ntBASIC2.47□□□□□ -2.01
VGLL1Q99990 AC106782.4-201ENST00000568264 210 ntBASIC2.47□□□□□ -2.01
VGLL1Q99990 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.47□□□□□ -2.01
VGLL1Q99990 LRRC37A5P-203ENST00000580181 585 ntBASIC2.47□□□□□ -2.01
VGLL1Q99990 AC022432.1-201ENST00000595739 310 ntBASIC2.47□□□□□ -2.01
VGLL1Q99990 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.47□□□□□ -2.01
VGLL1Q99990 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VGLL1Q99990 AL121772.2-201ENST00000614331 297 ntBASIC2.47□□□□□ -2.01
VGLL1Q99990 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.47□□□□□ -2.01
VGLL1Q99990 AC091903.1-201ENST00000624322 454 ntBASIC2.47□□□□□ -2.01
VGLL1Q99990 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.47□□□□□ -2.01
VGLL1Q99990 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.47□□□□□ -2.01
VGLL1Q99990 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.47□□□□□ -2.01
VGLL1Q99990 AC093831.2-201ENST00000624393 3427 ntBASIC2.46□□□□□ -2.01
VGLL1Q99990 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.46□□□□□ -2.01
VGLL1Q99990 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.46□□□□□ -2.01
VGLL1Q99990 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VGLL1Q99990 RNA5SP119-201ENST00000362715 117 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AL360182.1-201ENST00000397433 468 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 RNU6-607P-201ENST00000411283 108 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 RNU2-71P-201ENST00000411395 189 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AC063979.1-201ENST00000415539 377 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 RPL21P90-201ENST00000415692 466 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AL353621.1-201ENST00000418219 243 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 GOT2P5-201ENST00000433995 546 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 FABP5P14-201ENST00000437273 393 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 HMGN2P16-201ENST00000456802 261 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 RNU7-152P-201ENST00000458982 64 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 RPL31P60-201ENST00000478450 367 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 HMGB3P15-201ENST00000507326 574 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.46□□□□□ -2.02
VGLL1Q99990 Y_RNA.718-201ENST00000517110 102 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 RNU6-1315P-201ENST00000517187 99 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AC023632.4-201ENST00000517783 191 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 CYCSP27-201ENST00000527643 293 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.46□□□□□ -2.02
VGLL1Q99990 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 APOOP3-201ENST00000536787 586 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AC010653.1-201ENST00000571108 881 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 MIR3941-201ENST00000582572 103 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AL133393.1-201ENST00000603277 287 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AL162713.1-201ENST00000604480 262 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AC002044.1-201ENST00000606707 158 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AL627309.6-201ENST00000606857 840 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 AC098657.3-201ENST00000620434 263 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.46□□□□□ -2.02
VGLL1Q99990 AC034229.5-201ENST00000624258 185 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 MTND4LP32-201ENST00000636111 270 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VGLL1Q99990 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.02
VGLL1Q99990 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VGLL1Q99990 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.46□□□□□ -2.02
VGLL1Q99990 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.45□□□□□ -2.02
VGLL1Q99990 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VGLL1Q99990 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VGLL1Q99990 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VGLL1Q99990 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.45□□□□□ -2.02
VGLL1Q99990 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
VGLL1Q99990 RNA5SP124-201ENST00000362739 110 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 Y_RNA.132-201ENST00000363421 102 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 RNU6-266P-201ENST00000364225 107 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 Y_RNA.259-201ENST00000364619 101 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 SNORD42.2-201ENST00000365570 69 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 RNU6-43P-201ENST00000384302 107 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 U3.42-201ENST00000408746 214 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 RNU2-33P-201ENST00000410344 192 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 BTF3L4P3-201ENST00000418879 476 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.45□□□□□ -2.02
VGLL1Q99990 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.45□□□□□ -2.02
VGLL1Q99990 AL139281.1-201ENST00000422120 335 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 RPL21P66-201ENST00000426566 466 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.45□□□□□ -2.02
VGLL1Q99990 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.45□□□□□ -2.02
VGLL1Q99990 RPL37P6-201ENST00000460682 294 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 AC005741.1-201ENST00000511094 432 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.45□□□□□ -2.02
VGLL1Q99990 RNU1-86P-201ENST00000516108 154 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 RNU6-559P-201ENST00000516151 98 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 RNU1-107P-201ENST00000516617 154 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 AC026403.1-201ENST00000518938 295 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 AC009902.1-201ENST00000519351 183 ntBASIC2.45□□□□□ -2.02
VGLL1Q99990 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms