Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNA5SP76-201ENST00000516277 87 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.69□□□□□ -1.98
CDCA3Q99618 AL391261.3-201ENST00000557194 520 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.69□□□□□ -1.98
CDCA3Q99618 DEFB122-202ENST00000569013 197 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 MTCO3P13-201ENST00000577757 781 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDCA3Q99618 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.69□□□□□ -1.98
CDCA3Q99618 HMGN2P15-201ENST00000585707 270 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.69□□□□□ -1.98
CDCA3Q99618 AL391646.1-201ENST00000603860 190 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 AC008536.2-201ENST00000607284 349 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 AL359198.2-201ENST00000611836 194 ntBASIC2.69□□□□□ -1.98
CDCA3Q99618 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CDCA3Q99618 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.69□□□□□ -1.98
CDCA3Q99618 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
CDCA3Q99618 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDCA3Q99618 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.68□□□□□ -1.98
CDCA3Q99618 RPL9P7-201ENST00000330965 580 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 Y_RNA.1-201ENST00000352915 104 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 RNU6-1120P-201ENST00000362988 108 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 RNU1-100P-201ENST00000365255 165 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 MIR301A-201ENST00000385261 86 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 CISD1P1-201ENST00000393907 327 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 MIR888-201ENST00000401186 77 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.68□□□□□ -1.98
CDCA3Q99618 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.68□□□□□ -1.98
CDCA3Q99618 DPH3P2-201ENST00000422618 250 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.68□□□□□ -1.98
CDCA3Q99618 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.68□□□□□ -1.98
CDCA3Q99618 AL591704.1-201ENST00000432574 275 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDCA3Q99618 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.68□□□□□ -1.98
CDCA3Q99618 RNU7-182P-201ENST00000459009 62 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC126182.1-201ENST00000478134 357 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 RN7SL636P-201ENST00000497504 294 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 HMGB1P29-201ENST00000505659 499 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC104806.1-201ENST00000508720 308 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDCA3Q99618 DNAJC8P1-201ENST00000554535 372 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.68□□□□□ -1.98
CDCA3Q99618 MIR4775-201ENST00000581168 75 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC126118.1-201ENST00000607744 628 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC005046.1-201ENST00000608515 625 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 DUSP12P1-201ENST00000612874 516 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC011155.2-201ENST00000623202 216 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AP003122.6-201ENST00000623831 495 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 MIR6863-201ENST00000636112 90 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 AC010680.1-201ENST00000590024 3590 ntBASIC2.68□□□□□ -1.98
CDCA3Q99618 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.68□□□□□ -1.98
CDCA3Q99618 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDCA3Q99618 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 ZNF680P1-201ENST00000436625 1469 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 MTND4P35-201ENST00000604257 1375 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDCA3Q99618 RNU4-48P-201ENST00000365559 182 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 RNU1-73P-201ENST00000383971 164 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 MIR181A2-201ENST00000384863 110 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC068050.1-201ENST00000394891 380 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 AL359511.1-201ENST00000402970 211 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 AC080125.1-201ENST00000414888 684 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 HMGN2P30-201ENST00000423237 256 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 SKA2P1-201ENST00000425592 390 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 MTCO2P19-201ENST00000427513 598 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.67□□□□□ -1.98
CDCA3Q99618 DPPA3P1-201ENST00000448050 469 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 RPL26P9-201ENST00000457466 433 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 RPS29P15-201ENST00000458329 171 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC092798.1-201ENST00000458542 409 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 SRIP1-201ENST00000489235 288 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 RPL9P6-201ENST00000492764 598 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 SNORD27.1-201ENST00000516319 72 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CDCA3Q99618 AL359212.1-201ENST00000556608 614 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.67□□□□□ -1.98
CDCA3Q99618 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC124864.2-201ENST00000624736 186 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 SEPT14P19-203ENST00000633205 211 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 MIR6733-201ENST00000635723 61 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 U2.21-201ENST00000637295 81 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 CKAP2P1-201ENST00000555477 2049 ntBASIC2.67□□□□□ -1.98
CDCA3Q99618 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CDCA3Q99618 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
CDCA3Q99618 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDCA3Q99618 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CDCA3Q99618 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms