Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 MTCO2P19-201ENST00000427513 598 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AL356010.1-201ENST00000456364 102 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AL441985.1-201ENST00000457727 251 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC080013.2-201ENST00000460866 323 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC006445.1-201ENST00000491925 405 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 HMGB1P30-201ENST00000492455 606 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 ACA59.2-201ENST00000517061 156 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC010186.2-204ENST00000537668 439 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC025678.1-201ENST00000567861 338 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC009163.5-201ENST00000575421 637 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 UBL5P2-201ENST00000583788 219 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 MIR4765-201ENST00000585007 77 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AL161756.2-201ENST00000604597 246 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 AL021997.1-201ENST00000605757 193 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 MIR7112-201ENST00000616126 65 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 AC005609.4-201ENST00000625071 447 ntBASIC2.34□□□□□ -2.03
RAB40CQ96S21 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.34□□□□□ -2.03
RAB40CQ96S21 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
RAB40CQ96S21 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
RAB40CQ96S21 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.34□□□□□ -2.04
RAB40CQ96S21 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RAB40CQ96S21 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RAB40CQ96S21 AL359854.1-201ENST00000614203 1594 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 RNU6-748P-201ENST00000384648 107 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 RPS4XP8-201ENST00000402039 771 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 FABP5P14-201ENST00000437273 393 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 AL118520.1-201ENST00000450770 291 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 RNU7-63P-201ENST00000459054 62 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC092436.1-201ENST00000506450 503 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 MTND2P33-201ENST00000506452 1031 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 RNA5SP112-201ENST00000515937 99 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 HPRT1P3-201ENST00000539521 576 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC008752.3-201ENST00000588113 712 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC004223.2-201ENST00000590309 544 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC073539.2-201ENST00000597113 165 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 RPL12P50-201ENST00000603116 116 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC011890.2-201ENST00000613393 294 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.33□□□□□ -2.04
RAB40CQ96S21 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.33□□□□□ -2.04
RAB40CQ96S21 MIR26A1-201ENST00000362205 77 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU6-486P-201ENST00000363116 107 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 SNORA38.1-201ENST00000364172 131 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU6-384P-201ENST00000364900 104 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU6-715P-201ENST00000365204 103 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RAB40CQ96S21 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RAB40CQ96S21 AL591416.1-201ENST00000404015 867 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AL353621.1-201ENST00000418219 243 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 BX276092.3-201ENST00000424182 230 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 snoU109.2-201ENST00000459316 135 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AP001324.2-201ENST00000461163 319 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AC117440.1-201ENST00000474107 571 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RPS3AP14-201ENST00000483907 780 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 MTND3P25-201ENST00000509243 135 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AC105417.1-201ENST00000514691 285 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU1-86P-201ENST00000516108 154 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 MIR892C-201ENST00000516410 77 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU1-107P-201ENST00000516617 154 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU6-1178P-201ENST00000516674 107 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 RNU1-104P-201ENST00000517280 175 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 OR5AQ1P-201ENST00000527596 927 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AP002404.1-201ENST00000532005 451 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.32□□□□□ -2.04
RAB40CQ96S21 AGGF1P4-201ENST00000568249 801 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 MTCYBP33-201ENST00000575007 1130 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 MIR5571-201ENST00000577998 113 ntBASIC2.32□□□□□ -2.04
RAB40CQ96S21 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RAB40CQ96S21 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms