Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC027104.1-201ENST00000563702 681 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 AC022254.1-201ENST00000567857 235 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 CYP2C61P-201ENST00000604072 290 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 AC018638.7-201ENST00000605836 1114 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 AP000238.1-201ENST00000608759 426 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 AL121652.1-201ENST00000608851 448 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.93□□□□□ -2.26
IFT140Q96RY7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
IFT140Q96RY7 RNU6-251P-201ENST00000363235 104 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 SCARNA15.2-201ENST00000516409 127 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
IFT140Q96RY7 MIR6086-201ENST00000638065 55 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 Z82210.1-201ENST00000440037 231 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 MTND2P24-201ENST00000453434 806 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC093510.2-201ENST00000562820 896 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 SNORD39.3-201ENST00000584451 71 ntBASIC0.92□□□□□ -2.26
IFT140Q96RY7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.92□□□□□ -2.26
IFT140Q96RY7 RNU6-884P-201ENST00000363889 107 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 RNU6-338P-201ENST00000383888 105 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 MIR514A1-201ENST00000385133 98 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 RPL37P10-201ENST00000412884 288 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 PNRC2P1-201ENST00000423940 420 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 MTND5P15-201ENST00000434246 349 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.91□□□□□ -2.26
IFT140Q96RY7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.91□□□□□ -2.26
IFT140Q96RY7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.91□□□□□ -2.26
IFT140Q96RY7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.91□□□□□ -2.26
IFT140Q96RY7 AL391813.1-201ENST00000603098 260 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 AC009233.1-201ENST00000616477 371 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 AL590396.2-201ENST00000636511 1041 ntBASIC0.91□□□□□ -2.26
IFT140Q96RY7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.9□□□□□ -2.26
IFT140Q96RY7 ENSAP3-201ENST00000312710 333 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 MIR424-201ENST00000362227 98 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 RNU6-486P-201ENST00000363116 107 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 MIR30A-201ENST00000385092 71 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 RNU2-70P-201ENST00000410718 179 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 RNU6-564P-201ENST00000410983 104 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 ZNF863P-201ENST00000426746 417 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 TOMM22P2-201ENST00000430735 237 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.9□□□□□ -2.27
IFT140Q96RY7 AL161651.1-201ENST00000440882 223 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 PTENP1-201ENST00000447117 1215 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.9□□□□□ -2.27
IFT140Q96RY7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.9□□□□□ -2.27
IFT140Q96RY7 HSPA8P13-201ENST00000523715 472 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.9□□□□□ -2.27
IFT140Q96RY7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.9□□□□□ -2.27
IFT140Q96RY7 AL671309.1-201ENST00000603750 544 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 AC009974.1-201ENST00000608881 455 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 AC024581.2-201ENST00000619986 252 ntBASIC0.9□□□□□ -2.27
IFT140Q96RY7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.9□□□□□ -2.27
IFT140Q96RY7 RNU6-140P-201ENST00000384566 108 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 RNA5SP63-201ENST00000391225 112 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.89□□□□□ -2.27
IFT140Q96RY7 AL449283.1-202ENST00000418249 604 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.89□□□□□ -2.27
IFT140Q96RY7 AP003497.1-201ENST00000528472 562 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
IFT140Q96RY7 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.89□□□□□ -2.27
IFT140Q96RY7 AC008945.2-201ENST00000606056 604 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 FTX_3.1-201ENST00000610451 147 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 DUXAP10-204ENST00000612052 616 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.89□□□□□ -2.27
IFT140Q96RY7 AL391597.1-201ENST00000618707 694 ntBASIC0.89□□□□□ -2.27
IFT140Q96RY7 RNA5SP240-201ENST00000365355 128 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 MIR888-201ENST00000401186 77 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 AL160275.3-201ENST00000423876 471 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 RSU1P2-202ENST00000437884 485 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC022483.1-201ENST00000514020 567 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC034114.1-201ENST00000520293 285 ntBASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.88□□□□□ -2.27
IFT140Q96RY7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms