Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 NECAP1P2-201ENST00000455668 727 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU7-107P-201ENST00000459121 61 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC012123.2-201ENST00000485809 248 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AP000873.5-201ENST00000533906 236 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 MIR4511-201ENST00000582784 87 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC078899.2-201ENST00000595282 212 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 BX664608.1-201ENST00000610519 487 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC006971.1-201ENST00000407916 4486 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC016717.2-201ENST00000609089 5141 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 SNORD113-8-201ENST00000363497 74 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNY1-201ENST00000364228 113 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU6-1107P-201ENST00000364817 104 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU6-211P-201ENST00000384047 107 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU6-1135P-201ENST00000411083 103 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 TRGV5P-201ENST00000419915 354 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC073069.1-201ENST00000428657 441 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 Z75741.1-201ENST00000446793 314 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RPL21P134-201ENST00000453468 483 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC022795.1-201ENST00000473808 480 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AP001025.2-201ENST00000490908 477 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC010424.1-201ENST00000506336 297 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU6-1028P-201ENST00000517164 93 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC008011.1-201ENST00000545989 227 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AL020997.3-201ENST00000602843 359 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC015871.2-201ENST00000603605 948 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC011603.4-201ENST00000611325 277 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AP001486.2-201ENST00000561652 5113 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNA5SP224-201ENST00000365069 126 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU6-652P-201ENST00000365488 107 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU6-663P-201ENST00000391105 106 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 MIR1289-2-201ENST00000408360 111 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU4-72P-201ENST00000410754 173 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RPL31P12-201ENST00000422587 358 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RPL26P28-201ENST00000451325 435 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RNU7-136P-201ENST00000458819 69 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RPS4XP18-201ENST00000495480 763 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 PHBP14-201ENST00000512887 367 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 MIR3128-201ENST00000581957 66 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC012507.3-201ENST00000603556 477 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC010632.3-201ENST00000611377 369 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 AC092608.3-201ENST00000625017 386 ntBASIC1.25□□□□□ -2.21
HMCN1Q96RW7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC1.25□□□□□ -2.21
HMCN1Q96RW7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.24□□□□□ -2.21
HMCN1Q96RW7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
HMCN1Q96RW7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
HMCN1Q96RW7 RNU6-686P-201ENST00000364839 107 ntBASIC1.24□□□□□ -2.21
HMCN1Q96RW7 RNU6-1226P-201ENST00000384317 107 ntBASIC1.24□□□□□ -2.21
HMCN1Q96RW7 SNORA48.1-201ENST00000390879 135 ntBASIC1.24□□□□□ -2.21
HMCN1Q96RW7 RNA5SP241-201ENST00000391326 114 ntBASIC1.24□□□□□ -2.21
HMCN1Q96RW7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.24□□□□□ -2.21
HMCN1Q96RW7 MIR1298-201ENST00000408783 112 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms