Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AL133475.1-201ENST00000404414 305 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 MIR1261-201ENST00000408659 82 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 RNU6-1025P-201ENST00000410629 104 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 RN7SKP284-201ENST00000411002 343 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 RNA5SP270-201ENST00000411361 118 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AL139156.1-201ENST00000412785 841 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC097463.2-201ENST00000421074 142 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 SRIP2-201ENST00000428470 166 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AL445646.1-201ENST00000431784 216 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 RPL22P17-201ENST00000438729 315 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AL078601.1-201ENST00000444542 271 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 Z73417.1-201ENST00000447373 778 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC093899.1-201ENST00000457984 376 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 SNORD11.1-201ENST00000459482 85 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 MTND4P2-201ENST00000507767 1203 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 TPT1P8-201ENST00000510120 555 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 RANP3-201ENST00000530970 276 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AL157871.3-201ENST00000557231 293 ntBASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RPRD1AQ96P16 CENPCP1-201ENST00000533085 2578 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 SNORA75B-201ENST00000384053 137 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RNU6-190P-201ENST00000384154 102 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RNU6-166P-201ENST00000384371 107 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 SNORA46.1-201ENST00000391069 153 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AL079342.1-201ENST00000401460 267 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RPL22P18-201ENST00000417197 377 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC098592.1-201ENST00000419352 333 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RPS15AP12-201ENST00000419498 388 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC013410.2-201ENST00000422627 201 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC027124.2-201ENST00000428249 105 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AL008629.1-201ENST00000438615 184 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RPL7P12-201ENST00000446719 750 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 MTND1P12-201ENST00000455231 147 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 BTF3P15-201ENST00000455606 336 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AL441985.1-201ENST00000457727 251 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC112771.1-201ENST00000463581 102 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC018437.1-201ENST00000492214 406 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RPL38P4-201ENST00000502376 214 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RNU6-678P-201ENST00000516832 109 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 MTND4LP18-201ENST00000526864 291 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC079598.5-201ENST00000547460 117 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC091489.2-201ENST00000566263 604 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 MIR15A-201ENST00000607334 83 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC092953.2-201ENST00000608000 699 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AL355816.2-201ENST00000610049 647 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC104010.1-201ENST00000616889 150 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 SDR42E1P4-201ENST00000620894 481 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 AC007671.2-201ENST00000637344 619 ntBASIC2.1□□□□□ -2.07
RPRD1AQ96P16 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.1□□□□□ -2.07
RPRD1AQ96P16 RNU6-960P-201ENST00000364056 120 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 CIR1P3-201ENST00000405137 479 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 RN7SKP158-201ENST00000410453 326 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 RPS24P7-201ENST00000416921 246 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AL353621.1-201ENST00000418219 243 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 RNU2-10P-201ENST00000516375 211 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 SNORA31.25-201ENST00000517242 134 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AP003122.4-201ENST00000530980 758 ntBASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.09□□□□□ -2.07
RPRD1AQ96P16 AC024933.1-201ENST00000608472 348 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms