Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 HMGB3P2-201ENST00000411913 584 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 AC093151.1-201ENST00000427711 313 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 FTH1P6-201ENST00000430768 320 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 RNU6-1073P-201ENST00000517182 106 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 Y_RNA.721-201ENST00000517207 102 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FGD4Q96M96 TRAV28-201ENST00000557548 323 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.28□□□□□ -1.72
FGD4Q96M96 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.28□□□□□ -1.72
FGD4Q96M96 AC092447.9-201ENST00000603395 144 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 AL645944.1-201ENST00000603857 493 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 U3.45-201ENST00000607547 219 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
FGD4Q96M96 MPP6-209ENST00000625307 126 ntTSL 5 BASIC4.28□□□□□ -1.72
FGD4Q96M96 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.28□□□□□ -1.72
FGD4Q96M96 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.28□□□□□ -1.72
FGD4Q96M96 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FGD4Q96M96 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
FGD4Q96M96 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FGD4Q96M96 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.28□□□□□ -1.73
FGD4Q96M96 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.27□□□□□ -1.73
FGD4Q96M96 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FGD4Q96M96 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FGD4Q96M96 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FGD4Q96M96 Y_RNA.149-201ENST00000363558 117 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 Y_RNA.401-201ENST00000383965 117 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 RNU6-574P-201ENST00000384265 107 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 Y_RNA.557-201ENST00000384680 107 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 MIR490-201ENST00000384865 128 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 Y_RNA.645-201ENST00000391229 102 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 MIR1183-201ENST00000408856 89 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AL158071.1-201ENST00000430315 461 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 HMGB1P12-201ENST00000438594 598 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.27□□□□□ -1.73
FGD4Q96M96 RPL31P13-201ENST00000484151 370 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 RPL17P19-201ENST00000489069 552 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.27□□□□□ -1.73
FGD4Q96M96 ACA59.1-201ENST00000515966 143 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AC007458.1-201ENST00000542812 373 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 GNRHR2P1-201ENST00000555315 631 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AC008269.2-201ENST00000561915 1105 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 MIR3149-201ENST00000584629 83 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.27□□□□□ -1.73
FGD4Q96M96 AC104695.3-201ENST00000604052 296 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AC018889.1-201ENST00000605372 397 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AL121917.1-203ENST00000605534 577 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AL121655.1-201ENST00000605811 308 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 AC091953.5-201ENST00000622919 233 ntBASIC4.27□□□□□ -1.73
FGD4Q96M96 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.27□□□□□ -1.73
FGD4Q96M96 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
FGD4Q96M96 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.27□□□□□ -1.73
FGD4Q96M96 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.27□□□□□ -1.73
FGD4Q96M96 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FGD4Q96M96 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FGD4Q96M96 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
FGD4Q96M96 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FGD4Q96M96 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
FGD4Q96M96 HSPA8P1-201ENST00000425843 1833 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.26□□□□□ -1.73
FGD4Q96M96 RNVU1-14-201ENST00000384770 164 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FGD4Q96M96 SNORA40C-201ENST00000391285 128 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 RNU2-23P-201ENST00000410545 195 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.26□□□□□ -1.73
FGD4Q96M96 SNORD56-201ENST00000413522 71 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.26□□□□□ -1.73
FGD4Q96M96 BX276092.3-201ENST00000424182 230 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 AC007919.1-201ENST00000429380 217 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.26□□□□□ -1.73
FGD4Q96M96 AC009237.8-201ENST00000445492 379 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 RPL9P32-201ENST00000464118 620 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.26□□□□□ -1.73
FGD4Q96M96 AC022447.4-201ENST00000504053 364 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 RN7SKP18-201ENST00000516005 275 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 AC025755.1-201ENST00000521306 278 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.26□□□□□ -1.73
FGD4Q96M96 AC113195.1-201ENST00000579952 141 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 AC006006.1-201ENST00000603082 144 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 AL137849.1-201ENST00000604767 169 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 PRR13P7-201ENST00000605538 430 ntBASIC4.26□□□□□ -1.73
FGD4Q96M96 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FGD4Q96M96 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FGD4Q96M96 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
FGD4Q96M96 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.26□□□□□ -1.73
FGD4Q96M96 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.25□□□□□ -1.73
FGD4Q96M96 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
FGD4Q96M96 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.25□□□□□ -1.73
FGD4Q96M96 RNU6-933P-201ENST00000384424 107 ntBASIC4.25□□□□□ -1.73
FGD4Q96M96 Y_RNA.577-201ENST00000384794 101 ntBASIC4.25□□□□□ -1.73
FGD4Q96M96 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.25□□□□□ -1.73
FGD4Q96M96 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.25□□□□□ -1.73
FGD4Q96M96 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
FGD4Q96M96 AC096644.2-201ENST00000429278 159 ntBASIC4.25□□□□□ -1.73
FGD4Q96M96 RPS15AP10-201ENST00000432472 382 ntBASIC4.25□□□□□ -1.73
FGD4Q96M96 PIGFP3-201ENST00000441918 722 ntBASIC4.25□□□□□ -1.73
FGD4Q96M96 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
FGD4Q96M96 RPS3AP46-201ENST00000448352 682 ntBASIC4.25□□□□□ -1.73
FGD4Q96M96 CECR9-201ENST00000453421 199 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms