Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC092104.1-201ENST00000497346 1441 ntBASIC2.46□□□□□ -2.01
CCDC7Q96M83 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC7Q96M83 RNU6-288P-201ENST00000363690 104 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 RNU4-52P-201ENST00000384209 138 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 SNORA67.5-201ENST00000391036 107 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 ISCA1P1-201ENST00000426679 387 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 MED14P1-201ENST00000430517 648 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC7Q96M83 FABP5P15-201ENST00000453566 214 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 RN7SL274P-201ENST00000492268 272 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
CCDC7Q96M83 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC7Q96M83 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC7Q96M83 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC7Q96M83 ARL2BPP2-201ENST00000550907 489 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 OR1M4P-201ENST00000589199 287 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL353778.1-201ENST00000603149 408 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.6-201ENST00000603753 252 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.11-201ENST00000604059 253 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AC008162.1-201ENST00000604718 254 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.1-201ENST00000604752 252 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.5-201ENST00000605253 252 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.12-201ENST00000605291 253 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.8-201ENST00000605353 252 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AL670379.7-201ENST00000605823 252 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AC087683.2-201ENST00000611384 326 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AC004223.4-201ENST00000612426 332 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 DUSP12P1-201ENST00000612874 516 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AC009159.2-201ENST00000617603 606 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 AC079416.3-201ENST00000624479 549 ntBASIC2.46□□□□□ -2.02
CCDC7Q96M83 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC7Q96M83 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC7Q96M83 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC7Q96M83 RNU6-778P-201ENST00000363269 103 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC7Q96M83 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC7Q96M83 RNU6-750P-201ENST00000390946 107 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 RNU4-62P-201ENST00000410125 130 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 RNU2-36P-201ENST00000410361 191 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 RPL26P27-201ENST00000414397 437 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 AP1B1P2-201ENST00000416196 106 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 RPS15AP12-201ENST00000419498 388 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 HMGB1P9-201ENST00000429856 646 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 AL590365.1-201ENST00000450788 243 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 RNU7-125P-201ENST00000458760 62 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 SNORD97-201ENST00000459187 142 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC7Q96M83 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 MRPS36P5-201ENST00000551909 298 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 NACAP3-201ENST00000552100 481 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 RPS3AP4-201ENST00000555161 764 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.45□□□□□ -2.02
CCDC7Q96M83 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC7Q96M83 AC090616.2-202ENST00000584248 222 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 AC007363.1-201ENST00000604736 620 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 AL161734.1-201ENST00000609720 557 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 AC027807.2-201ENST00000616099 408 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 MIR7844-201ENST00000616161 122 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 MIR8070-201ENST00000616510 88 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 AP002791.1-201ENST00000623291 381 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 FRG1KP-201ENST00000623592 341 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 MIR3199-2-201ENST00000636243 86 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 MIR7515-201ENST00000637837 67 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC7Q96M83 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC7Q96M83 AC110491.1-201ENST00000562191 2010 ntBASIC2.45□□□□□ -2.02
CCDC7Q96M83 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC7Q96M83 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC7Q96M83 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 AL139276.1-201ENST00000311910 1001 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 MIR337-201ENST00000362281 93 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 RPS15AP34-201ENST00000487776 387 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC108078.2-201ENST00000510750 236 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC7Q96M83 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC7Q96M83 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC008015.1-201ENST00000555505 465 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 MIR5697-201ENST00000578045 78 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 MIR3118-1-201ENST00000581787 76 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 AC025594.3-201ENST00000613068 790 ntBASIC2.44□□□□□ -2.02
CCDC7Q96M83 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC7Q96M83 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC7Q96M83 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC7Q96M83 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC7Q96M83 SNORA68.1-201ENST00000364537 132 ntBASIC2.43□□□□□ -2.02
CCDC7Q96M83 Y_RNA.560-201ENST00000384689 102 ntBASIC2.43□□□□□ -2.02
CCDC7Q96M83 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC7Q96M83 MTND5P25-201ENST00000430499 799 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms