Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MTATP6P7-201ENST00000453315 681 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 TOMM22P6-201ENST00000465035 409 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.11□□□□□ -2.07
USP47Q96K76 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.11□□□□□ -2.07
USP47Q96K76 DEFB108A-201ENST00000530110 222 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 AL121821.2-201ENST00000556081 394 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 MIR4765-201ENST00000585007 77 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.11□□□□□ -2.07
USP47Q96K76 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.11□□□□□ -2.07
USP47Q96K76 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.11□□□□□ -2.07
USP47Q96K76 AL391001.1-201ENST00000602747 715 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 AC091152.3-201ENST00000604227 325 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 MIR6840-201ENST00000611937 71 ntBASIC2.11□□□□□ -2.07
USP47Q96K76 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.11□□□□□ -2.07
USP47Q96K76 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP47Q96K76 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
USP47Q96K76 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
USP47Q96K76 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.11□□□□□ -2.07
USP47Q96K76 NACAP2-201ENST00000318548 624 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 RNU6-433P-201ENST00000363216 104 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 RNU6-701P-201ENST00000384059 107 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 RNU6-769P-201ENST00000384407 104 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 RNU2-40P-201ENST00000410833 196 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 CYCSP48-201ENST00000417124 323 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 DYNLL1P5-201ENST00000467158 270 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 SNORA31.3-201ENST00000516029 96 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 SNORD19.2-201ENST00000516978 73 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AP004247.1-201ENST00000531556 1289 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AC013828.2-201ENST00000532487 235 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.1□□□□□ -2.07
USP47Q96K76 AL355598.1-201ENST00000604169 202 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 BCRP9-201ENST00000605312 388 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AL355472.4-201ENST00000610233 626 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 MIR6504-201ENST00000613520 61 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 MIR7157-201ENST00000635801 60 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
USP47Q96K76 RNU6-1284P-201ENST00000363701 100 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 RNU6-19P-201ENST00000384718 107 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 MIR517C-201ENST00000385103 95 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 NDUFS5P1-201ENST00000405668 289 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 RPL30P4-201ENST00000429309 333 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.1□□□□□ -2.07
USP47Q96K76 OR6C5P-201ENST00000452388 923 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.1□□□□□ -2.07
USP47Q96K76 AC068781.1-201ENST00000488231 618 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AP005902.1-201ENST00000521358 186 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.1□□□□□ -2.07
USP47Q96K76 AP006587.4-201ENST00000526053 529 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AP005435.4-201ENST00000529514 284 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.1□□□□□ -2.07
USP47Q96K76 AC073544.2-201ENST00000601155 540 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AC005014.3-201ENST00000605985 190 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AC106052.1-201ENST00000608029 497 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AC011939.3-201ENST00000613686 466 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.1□□□□□ -2.07
USP47Q96K76 AC233981.2-201ENST00000611524 1614 ntBASIC2.1□□□□□ -2.07
USP47Q96K76 RNA5SP125-201ENST00000364843 120 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.09□□□□□ -2.08
USP47Q96K76 RNU6-906P-201ENST00000384700 70 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.09□□□□□ -2.08
USP47Q96K76 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.09□□□□□ -2.08
USP47Q96K76 USP9YP6-201ENST00000413550 854 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.09□□□□□ -2.08
USP47Q96K76 ELOCP9-201ENST00000418624 239 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.09□□□□□ -2.08
USP47Q96K76 MTCO2P23-201ENST00000425216 680 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 AL354695.1-201ENST00000427935 228 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 PGBD4P3-201ENST00000440731 581 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
USP47Q96K76 AL009048.1-201ENST00000450437 298 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.09□□□□□ -2.08
USP47Q96K76 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.09□□□□□ -2.08
USP47Q96K76 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.09□□□□□ -2.08
USP47Q96K76 RNU6-581P-201ENST00000516214 105 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.09□□□□□ -2.08
USP47Q96K76 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.09□□□□□ -2.08
USP47Q96K76 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.09□□□□□ -2.08
USP47Q96K76 SEPT7P9-203ENST00000604116 343 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 SNORD14A-201ENST00000606526 91 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 AC069294.1-201ENST00000608397 350 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.09□□□□□ -2.08
USP47Q96K76 AC091965.5-201ENST00000624785 342 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 MIR203B-201ENST00000636080 86 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.08
USP47Q96K76 MTND5P30-201ENST00000452896 1731 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.08□□□□□ -2.08
USP47Q96K76 SNORA7.1-201ENST00000363750 139 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 RNU5A-8P-201ENST00000364102 114 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 MIR147B-201ENST00000390185 80 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 SNORA67.6-201ENST00000391093 99 ntBASIC2.08□□□□□ -2.08
USP47Q96K76 AC078974.1-201ENST00000411597 223 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms