Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 snoU13.3-201ENST00000459441 104 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC087884.1-201ENST00000469738 328 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 RPL21P103-201ENST00000479921 488 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC104136.1-201ENST00000512969 394 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 SNORA25.10-201ENST00000515926 124 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 RNU6-840P-201ENST00000517275 65 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC007536.1-201ENST00000533382 349 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AL117187.1-201ENST00000555482 181 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC010653.1-201ENST00000571108 881 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC093227.2-201ENST00000589357 285 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 BNIP3P16-201ENST00000589779 534 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 SDR42E1P2-201ENST00000614861 481 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC007485.1-201ENST00000616755 206 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 AC087588.2-201ENST00000617667 426 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 MIR6733-201ENST00000635723 61 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 MTND5P30-201ENST00000452896 1731 ntBASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM2Q96JY6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 RNA5SP51-201ENST00000364750 119 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 Y_RNA.404-201ENST00000383978 102 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 RNU6-14P-201ENST00000384630 106 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 RN7SKP156-201ENST00000410308 342 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 CYCSP19-201ENST00000411715 316 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC236972.1-201ENST00000433225 199 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 HIGD1AP11-201ENST00000438361 280 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 RNU6-953P-201ENST00000459154 107 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 RN7SL499P-201ENST00000481141 276 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 Y_RNA.670-201ENST00000516255 105 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 CYCSP27-201ENST00000527643 293 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC008269.2-201ENST00000561915 1105 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 PLCE1P1-201ENST00000622094 305 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC022418.1-201ENST00000624118 445 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 AC090337.1-201ENST00000579651 2074 ntBASIC3.59□□□□□ -1.83
PDLIM2Q96JY6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
PDLIM2Q96JY6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PDLIM2Q96JY6 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.59□□□□□ -1.84
PDLIM2Q96JY6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PDLIM2Q96JY6 ZNF807-201ENST00000328088 1707 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 Y_RNA.364-201ENST00000365532 101 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 Y_RNA.401-201ENST00000383965 117 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 Y_RNA.463-201ENST00000384271 102 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 MIR568-201ENST00000385036 95 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 RNU6-837P-201ENST00000391056 108 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 Y_RNA.594-201ENST00000410373 140 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AL591212.2-201ENST00000433923 257 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 RPL21P23-201ENST00000446654 460 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AL359073.1-201ENST00000448036 403 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 RPL12P25-201ENST00000455592 494 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 MTATP8P1-201ENST00000467115 207 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC026801.1-201ENST00000497178 464 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC026782.1-201ENST00000512952 449 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC087854.1-201ENST00000519706 414 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC026371.1-201ENST00000551867 419 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 MIR3149-201ENST00000584629 83 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC006557.5-201ENST00000603126 811 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC018462.2-201ENST00000605375 395 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 AC006157.1-201ENST00000611750 366 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 MIR4275-201ENST00000636486 87 ntBASIC3.58□□□□□ -1.84
PDLIM2Q96JY6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 Y_RNA.252-201ENST00000364556 101 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 RNU6-214P-201ENST00000384130 107 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 RNU6-45P-201ENST00000384471 107 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 RNU6-95P-201ENST00000384697 107 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 RNU6-331P-201ENST00000384724 107 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 SNORA75.6-201ENST00000391318 127 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 AL160275.3-201ENST00000423876 471 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 MTCYBP9-201ENST00000431021 303 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.57□□□□□ -1.84
PDLIM2Q96JY6 SETP5-201ENST00000437270 562 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms