Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC011890.2-201ENST00000613393 294 ntBASIC3.72□□□□□ -1.81
CCDC136Q96JN2 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC136Q96JN2 AC073534.2-201ENST00000620377 381 ntBASIC3.72□□□□□ -1.81
CCDC136Q96JN2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC136Q96JN2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC136Q96JN2 CDC27P3-201ENST00000635418 1910 ntBASIC3.72□□□□□ -1.81
CCDC136Q96JN2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.71□□□□□ -1.81
CCDC136Q96JN2 AL035425.3-201ENST00000564206 4996 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AL139276.1-201ENST00000311910 1001 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 SNORA70.4-201ENST00000365509 134 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 RNU2-29P-201ENST00000410423 189 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 PGBD4P6-201ENST00000421501 610 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC006946.1-201ENST00000429106 328 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AL627311.1-201ENST00000431514 115 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC016691.1-201ENST00000441321 413 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 PSPHP1-201ENST00000450062 261 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 BX510359.1-201ENST00000456973 237 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC009646.1-201ENST00000510455 318 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 RNU6-506P-201ENST00000516553 94 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC104383.1-201ENST00000530297 370 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC096577.2-201ENST00000611455 153 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 AC010378.1-201ENST00000619270 362 ntBASIC3.71□□□□□ -1.82
CCDC136Q96JN2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 RNU6-1085P-201ENST00000363576 107 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 RNU6-1127P-201ENST00000384580 107 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 MIR512-1-201ENST00000384913 84 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 RPS4XP7-201ENST00000406274 780 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 C8orf59P1-201ENST00000429930 303 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 SNRPFP3-201ENST00000457792 225 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 snoU13.22-201ENST00000459428 104 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC107626.1-201ENST00000471084 183 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC117440.1-201ENST00000474107 571 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC103975.1-201ENST00000482506 483 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 RN7SL297P-201ENST00000483161 293 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AL163973.1-201ENST00000484753 577 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC116655.1-201ENST00000508324 901 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 RNU6-314P-201ENST00000516574 104 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 Y_RNA.704-201ENST00000516851 102 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 EIF1P4-201ENST00000572664 335 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC007151.1-201ENST00000572774 483 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC007621.1-201ENST00000604544 437 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 uc_338.11-201ENST00000619132 160 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 AC091953.5-201ENST00000622919 233 ntBASIC3.7□□□□□ -1.82
CCDC136Q96JN2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC136Q96JN2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 RNU1-100P-201ENST00000365255 165 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 Y_RNA.516-201ENST00000384541 124 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AL139095.1-201ENST00000404326 391 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AL353621.1-201ENST00000418219 243 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 SUMO1P4-201ENST00000429430 302 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC136Q96JN2 SCARNA18-201ENST00000459004 134 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC008571.1-201ENST00000467232 300 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 RN7SL807P-201ENST00000470923 297 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC019235.1-201ENST00000503847 207 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC136Q96JN2 SNORA31.6-201ENST00000516241 130 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 RNU6-826P-201ENST00000516827 104 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC107016.2-201ENST00000547968 190 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC136Q96JN2 MIR5680-201ENST00000577577 84 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC138761.3-201ENST00000579993 334 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AL391813.1-201ENST00000603098 260 ntBASIC3.69□□□□□ -1.82
CCDC136Q96JN2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC136Q96JN2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC136Q96JN2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC136Q96JN2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC136Q96JN2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC136Q96JN2 RNA5SP387-201ENST00000364226 106 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms