Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 HSPE1P11-201ENST00000339579 310 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 RNU6-1097P-201ENST00000363586 107 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 RNU6-960P-201ENST00000364056 120 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 Y_RNA.372-201ENST00000365599 102 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 SNORA18.3-201ENST00000384122 132 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 MIR558-201ENST00000384920 94 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 MIR1-2-201ENST00000384961 85 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 RNU6-780P-201ENST00000391030 104 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AL138827.1-201ENST00000402666 306 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 PTGES3P4-201ENST00000426243 356 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AL591212.2-201ENST00000433923 257 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 GPR143P-201ENST00000434155 205 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 HMGB3P12-201ENST00000438745 556 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AL135938.1-201ENST00000443141 297 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC233279.1-201ENST00000455300 423 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC139453.3-201ENST00000493276 369 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 SNORA74D-201ENST00000516404 141 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 RNU7-51P-201ENST00000516560 62 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 HMGB1P41-201ENST00000520234 440 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AK6P1-201ENST00000540219 478 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AP001094.1-201ENST00000579805 193 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 MIR4765-201ENST00000585007 77 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AP000787.2-201ENST00000604432 568 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AP002360.4-201ENST00000606980 481 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.67□□□□□ -1.98
PDLIM5Q96HC4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 RNU6-456P-201ENST00000384493 107 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 MIR9-1-201ENST00000385198 89 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 RPS4XP8-201ENST00000402039 771 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AL590002.1-201ENST00000406554 418 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 MTATP6P18-201ENST00000417994 673 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 MICF-203ENST00000432679 129 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 FGF7P6-202ENST00000451282 293 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AL121769.1-201ENST00000469473 401 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AP003034.1-201ENST00000534621 422 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 SUB1P2-201ENST00000556401 297 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 CYCSP39-201ENST00000565821 309 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC023824.2-201ENST00000566185 400 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 MIR3199-1-201ENST00000582434 88 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC098848.2-201ENST00000588023 330 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AC005261.5-201ENST00000596280 355 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 Z84480.1-201ENST00000605131 311 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AL121992.2-201ENST00000606262 256 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 AP001596.2-201ENST00000608410 312 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 U6atac.1-201ENST00000616025 117 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 Z99571.1-201ENST00000636677 394 ntBASIC2.66□□□□□ -1.98
PDLIM5Q96HC4 RNU6-1120P-201ENST00000362988 108 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 MIR592-201ENST00000384959 97 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC068050.1-201ENST00000394891 380 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 HMGN2P35-201ENST00000412164 270 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 SUMO1P4-201ENST00000429430 302 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC087499.2-201ENST00000432861 149 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 MTATP6P16-201ENST00000434543 526 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 FABP5P14-201ENST00000437273 393 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 MTATP6P13-201ENST00000438531 667 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC079781.2-201ENST00000446424 169 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC126389.1-201ENST00000477436 290 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 RPL22P13-201ENST00000493291 347 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC098799.2-201ENST00000509466 868 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 RNU6-718P-201ENST00000516166 105 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 SCARNA3-201ENST00000517097 143 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.65□□□□□ -1.99
PDLIM5Q96HC4 AC012507.3-201ENST00000603556 477 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms