Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MIR10A-201ENST00000385043 110 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 MIR561-201ENST00000385216 97 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AL031577.2-201ENST00000404133 280 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 MTCO2P17-201ENST00000424336 677 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 MTND5P25-201ENST00000430499 799 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.53□□□□□ -2
VMP1Q96GC9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.53□□□□□ -2
VMP1Q96GC9 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 HMGB1P30-201ENST00000492455 606 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 RNA5SP402-201ENST00000517148 110 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AC106038.2-201ENST00000520706 568 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.53□□□□□ -2
VMP1Q96GC9 AP004607.1-201ENST00000524456 203 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 CR383656.8-201ENST00000549046 145 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.53□□□□□ -2
VMP1Q96GC9 MIR4319-201ENST00000577285 85 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.53□□□□□ -2
VMP1Q96GC9 AL713866.2-201ENST00000603579 219 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AC093788.1-201ENST00000609356 927 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.53□□□□□ -2
VMP1Q96GC9 AL157786.1-207ENST00000627771 695 ntBASIC2.53□□□□□ -2
VMP1Q96GC9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 RNU6-942P-201ENST00000363002 107 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 SNORA20.2-201ENST00000383922 131 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 RNU1-57P-201ENST00000384491 166 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 RNU6-1179P-201ENST00000384667 107 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 MIR95-201ENST00000385072 81 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 RNA5SP111-201ENST00000411386 101 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 AIMP1P2-201ENST00000425294 312 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 SNRPFP4-201ENST00000456366 242 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC022616.3-201ENST00000523940 148 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 AP000889.2-201ENST00000532684 490 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC005771.1-201ENST00000585581 349 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC078899.2-201ENST00000595282 212 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 BNIP3P8-201ENST00000597863 560 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 BNIP3P30-201ENST00000601184 574 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC012065.4-201ENST00000602445 679 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC021646.1-201ENST00000605469 484 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 AC091304.9-201ENST00000612091 226 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 AP003485.2-201ENST00000623636 610 ntBASIC2.52□□□□□ -2.01
VMP1Q96GC9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VMP1Q96GC9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VMP1Q96GC9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VMP1Q96GC9 SNORD14B-201ENST00000364533 90 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 EDDM3CP-201ENST00000415977 425 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC119751.5-201ENST00000514077 770 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 RNU2-46P-201ENST00000517038 113 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC109329.1-201ENST00000518744 317 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 RPL30P11-203ENST00000598995 310 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 AL353778.1-201ENST00000603149 408 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC073410.2-201ENST00000603240 332 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.51□□□□□ -2.01
VMP1Q96GC9 AL133173.2-201ENST00000614270 90 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 AC108479.2-201ENST00000617314 601 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 HAUS6P2-201ENST00000433254 2404 ntBASIC2.51□□□□□ -2.01
VMP1Q96GC9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VMP1Q96GC9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VMP1Q96GC9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VMP1Q96GC9 RNU6-1010P-201ENST00000362757 107 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 RNU6-553P-201ENST00000364047 96 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 UBE2V1P10-201ENST00000414685 269 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC112220.1-201ENST00000434628 355 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 PSPHP1-201ENST00000450062 261 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 RPS27P21-201ENST00000486977 252 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 RBBP4P6-201ENST00000508098 202 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC096725.1-201ENST00000514266 313 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 SNORA48.11-201ENST00000517015 89 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC008521.1-201ENST00000587471 187 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 AC023510.2-201ENST00000622162 746 ntBASIC2.5□□□□□ -2.01
VMP1Q96GC9 AF246928.1-201ENST00000623768 87 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms