Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AP000873.5-201ENST00000533906 236 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AL512310.1-201ENST00000548639 172 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 MIR4506-201ENST00000584693 77 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 NBR2-204ENST00000587322 63 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC068790.2-201ENST00000602601 557 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AL138889.2-201ENST00000603883 242 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC069294.1-201ENST00000608397 350 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC006566.1-201ENST00000608943 513 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC011890.2-201ENST00000613393 294 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC009509.4-201ENST00000619202 509 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC092656.1-203ENST00000624134 423 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 MTND5P19-201ENST00000424872 1794 ntBASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SNRNP40Q96DI7 SNORA62.1-201ENST00000364287 154 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 RNU1-100P-201ENST00000365255 165 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 RNU6-108P-201ENST00000365558 107 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 RNU6-116P-201ENST00000384042 109 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 SNORA46-201ENST00000384762 135 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 Y_RNA.576-201ENST00000384781 102 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 MIR10A-201ENST00000385043 110 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC245054.2-201ENST00000415639 319 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 MICF-203ENST00000432679 129 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 MTCO1P19-201ENST00000443487 500 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 MTND1P29-201ENST00000448112 647 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC022493.1-201ENST00000492984 337 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 RNA5SP148-201ENST00000516527 94 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 OR4R1P-201ENST00000529879 463 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 RSL24D1P11-201ENST00000591045 491 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AL670379.10-201ENST00000604330 253 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AL670379.9-201ENST00000605428 253 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC080013.6-201ENST00000606185 215 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC245008.1-201ENST00000608123 476 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC109347.2-201ENST00000610220 349 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC009090.3-201ENST00000616553 565 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SNRNP40Q96DI7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 SNORA51.4-201ENST00000364993 124 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 Y_RNA.367-201ENST00000365544 101 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 RNU6-348P-201ENST00000384386 107 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 U3.37-201ENST00000408528 213 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 RN7SKP58-201ENST00000411010 305 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 BMS1P22-201ENST00000414726 313 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC016831.2-201ENST00000417179 352 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 MTND4P32-201ENST00000437189 1237 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC004383.1-201ENST00000438135 289 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC104058.1-201ENST00000448028 297 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 MTCYBP1-201ENST00000454315 1119 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 MTCO2P18-201ENST00000457151 658 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 snoU109.2-201ENST00000459316 135 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 RPL21P41-201ENST00000459863 264 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 MTAPP1-201ENST00000489154 819 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC090096.1-201ENST00000489168 390 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 HMGB1P30-201ENST00000492455 606 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC096725.1-201ENST00000514266 313 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 SNORA25.11-201ENST00000515935 105 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 OR5AQ1P-201ENST00000527596 927 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AP003072.2-201ENST00000527756 676 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC010186.2-204ENST00000537668 439 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC012213.3-201ENST00000577199 777 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC119751.7-201ENST00000600494 245 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC048344.4-201ENST00000619744 527 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC093648.1-201ENST00000623546 606 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AL359740.1-201ENST00000624340 592 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 AC064859.1-201ENST00000624741 174 ntBASIC2.49□□□□□ -2.01
SNRNP40Q96DI7 SEPT14P19-203ENST00000633205 211 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms