Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFT1Q96AA3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFT1Q96AA3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFT1Q96AA3 RNU5E-4P-201ENST00000364931 120 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 Y_RNA.381-201ENST00000365666 102 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.53□□□□□ -2
RFT1Q96AA3 Y_RNA.450-201ENST00000384198 113 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 SNORA54-201ENST00000384281 123 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 RNVU1-14-201ENST00000384770 164 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MIR518D-201ENST00000385014 87 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MIR181A1-201ENST00000385026 110 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MIR670-201ENST00000390142 98 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 CISD1P1-201ENST00000393907 327 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 GSTA9P-201ENST00000406231 611 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 RNA5SP120-201ENST00000410900 112 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 EEF1A1P40-201ENST00000412883 573 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 RPL30P16-201ENST00000419341 429 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.53□□□□□ -2
RFT1Q96AA3 YME1L1P1-201ENST00000429435 297 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MTCO2P11-201ENST00000431069 680 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MTND3P21-201ENST00000433774 331 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 AL513043.1-201ENST00000439124 535 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 RPS15AP7-201ENST00000439294 405 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 RPS15AP9-201ENST00000439856 381 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
RFT1Q96AA3 AL161651.1-201ENST00000440882 223 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.53□□□□□ -2
RFT1Q96AA3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 AC117440.1-201ENST00000474107 571 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 AC022493.1-201ENST00000492984 337 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.53□□□□□ -2
RFT1Q96AA3 AC009812.2-201ENST00000517657 457 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.53□□□□□ -2
RFT1Q96AA3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFT1Q96AA3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.53□□□□□ -2
RFT1Q96AA3 MIR548S-201ENST00000581352 82 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RFT1Q96AA3 OR1M4P-201ENST00000589199 287 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 AC091152.3-201ENST00000604227 325 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 AL158032.1-201ENST00000605401 106 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RFT1Q96AA3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 MIR622-201ENST00000638396 96 ntBASIC2.53□□□□□ -2
RFT1Q96AA3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2.01
RFT1Q96AA3 AC135776.4-201ENST00000624300 1904 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RFT1Q96AA3 RNU6-181P-201ENST00000363225 107 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 Y_RNA.159-201ENST00000363674 87 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 RNA5SP267-201ENST00000364893 126 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 Y_RNA.296-201ENST00000364930 108 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RFT1Q96AA3 MIR512-1-201ENST00000384913 84 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 MIR454-201ENST00000390180 115 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 U3.26-201ENST00000391236 204 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC068050.1-201ENST00000394891 380 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 RNU4-55P-201ENST00000410731 137 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 MTCO2P19-201ENST00000427513 598 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 CALM2P2-201ENST00000428512 440 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 PSPHP1-201ENST00000450062 261 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 NIPA2P5-201ENST00000452282 464 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 C1DP4-201ENST00000455429 424 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC090525.1-201ENST00000479116 478 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC006445.1-201ENST00000491925 405 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 EIF4EP3-201ENST00000498782 656 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 RBBP4P6-201ENST00000508098 202 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC009646.1-201ENST00000510455 318 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC008885.1-201ENST00000514930 301 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 RNU6-445P-201ENST00000516949 107 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 RANP3-201ENST00000530970 276 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 ZNF519P2-201ENST00000557032 169 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 LINC00933-203ENST00000559812 219 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AL391840.1-201ENST00000571144 367 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 MIR548AC-201ENST00000585049 88 ntBASIC2.52□□□□□ -2.01
RFT1Q96AA3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.52□□□□□ -2.01
RFT1Q96AA3 AP000907.4-201ENST00000604143 237 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms