Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 U8.12-201ENST00000384701 133 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 MIR301A-201ENST00000385261 86 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 SNORA48.8-201ENST00000391324 134 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 SNORA11-201ENST00000408789 128 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 Y_RNA.594-201ENST00000410373 140 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 RNU6-1050P-201ENST00000410388 107 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.02□□□□□ -1.77
ERCC4Q92889 AC006989.1-201ENST00000427212 131 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 U8.18-201ENST00000459285 133 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 AL133162.1-201ENST00000463228 453 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 AC010265.1-201ENST00000513509 211 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 RNU1-86P-201ENST00000516108 154 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 SNORA70.16-201ENST00000516390 95 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 RNU1-107P-201ENST00000516617 154 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.02□□□□□ -1.77
ERCC4Q92889 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.02□□□□□ -1.77
ERCC4Q92889 TGIF1P1-201ENST00000558095 802 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 HSPE1P5-201ENST00000561489 272 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 MIR5685-201ENST00000579080 79 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 AL161423.1-201ENST00000613700 262 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 AC022149.2-201ENST00000621061 203 ntBASIC4.02□□□□□ -1.77
ERCC4Q92889 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ERCC4Q92889 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ERCC4Q92889 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ERCC4Q92889 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ERCC4Q92889 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC4Q92889 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC4Q92889 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC4Q92889 RNU6-50P-201ENST00000362356 103 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 AP002088.1-201ENST00000382740 395 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 RNU6-890P-201ENST00000384121 107 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ERCC4Q92889 RNU6-308P-201ENST00000390957 107 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 MIR1290-201ENST00000408735 78 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC4Q92889 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC4Q92889 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC4Q92889 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.01□□□□□ -1.77
ERCC4Q92889 RPS4XP22-201ENST00000480755 780 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
ERCC4Q92889 RNU6-1256P-201ENST00000516539 103 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 RNA5SP468-201ENST00000516782 93 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 RNU1-54P-201ENST00000517181 120 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 TRAV37-201ENST00000553906 342 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.01□□□□□ -1.77
ERCC4Q92889 AC006130.2-201ENST00000586202 326 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 ELOCP5-201ENST00000604924 333 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 AC009229.3-201ENST00000608056 282 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.01□□□□□ -1.77
ERCC4Q92889 MTND5P30-201ENST00000452896 1731 ntBASIC4.01□□□□□ -1.77
ERCC4Q92889 SRP72P2-201ENST00000344851 1979 ntBASIC4□□□□□ -1.77
ERCC4Q92889 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC4Q92889 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4□□□□□ -1.77
ERCC4Q92889 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4□□□□□ -1.77
ERCC4Q92889 RNU6-395P-201ENST00000365662 106 ntBASIC4□□□□□ -1.77
ERCC4Q92889 RNU6-639P-201ENST00000384074 107 ntBASIC4□□□□□ -1.77
ERCC4Q92889 SNORA75.6-201ENST00000391318 127 ntBASIC4□□□□□ -1.77
ERCC4Q92889 RNA5SP129-201ENST00000410276 118 ntBASIC4□□□□□ -1.77
ERCC4Q92889 RN7SKP156-201ENST00000410308 342 ntBASIC4□□□□□ -1.77
ERCC4Q92889 RNU2-33P-201ENST00000410344 192 ntBASIC4□□□□□ -1.77
ERCC4Q92889 Z99755.1-201ENST00000414048 380 ntBASIC4□□□□□ -1.77
ERCC4Q92889 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4□□□□□ -1.77
ERCC4Q92889 HMGB1P9-201ENST00000429856 646 ntBASIC4□□□□□ -1.77
ERCC4Q92889 AL035666.1-201ENST00000446195 348 ntBASIC4□□□□□ -1.77
ERCC4Q92889 AC011005.2-201ENST00000487324 359 ntBASIC4□□□□□ -1.77
ERCC4Q92889 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4□□□□□ -1.77
ERCC4Q92889 AC110768.1-201ENST00000509222 400 ntBASIC4□□□□□ -1.77
ERCC4Q92889 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4□□□□□ -1.77
ERCC4Q92889 MIR2276-201ENST00000516886 89 ntBASIC4□□□□□ -1.77
ERCC4Q92889 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4□□□□□ -1.77
ERCC4Q92889 ATP5F1P5-201ENST00000526403 760 ntBASIC4□□□□□ -1.77
ERCC4Q92889 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4□□□□□ -1.77
ERCC4Q92889 AC026333.2-201ENST00000542164 106 ntBASIC4□□□□□ -1.77
ERCC4Q92889 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4□□□□□ -1.77
ERCC4Q92889 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4□□□□□ -1.77
ERCC4Q92889 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4□□□□□ -1.77
ERCC4Q92889 AC136443.5-201ENST00000603741 370 ntBASIC4□□□□□ -1.77
ERCC4Q92889 AC007938.3-201ENST00000604965 623 ntBASIC4□□□□□ -1.77
ERCC4Q92889 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC4Q92889 U4.6-201ENST00000621618 127 ntBASIC4□□□□□ -1.77
ERCC4Q92889 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
ERCC4Q92889 ANKRD26P2-201ENST00000445530 1710 ntBASIC4□□□□□ -1.77
ERCC4Q92889 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ERCC4Q92889 AC007496.3-201ENST00000624987 3443 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AL672296.1-201ENST00000427780 2158 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AC118273.1-201ENST00000525324 3006 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC4Q92889 Y_RNA.33-201ENST00000362591 102 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 Y_RNA.148-201ENST00000363557 117 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 Y_RNA.324-201ENST00000365165 102 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ERCC4Q92889 Y_RNA.463-201ENST00000384271 102 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 MIR554-201ENST00000384874 96 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 CYCSP19-201ENST00000411715 316 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.99□□□□□ -1.77
ERCC4Q92889 RPL27AP8-201ENST00000424277 446 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AL356867.1-201ENST00000429623 299 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 RNU7-187P-201ENST00000458985 68 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 MIR2053-201ENST00000459295 91 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms